Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1069 86.0 1e-14 SEQ65821 82.4 1e-13 >seq1069 Length=80516 Score = 86.0 bits (94), Expect = 1e-14 Identities = 125/173 (72%), Gaps = 14/173 (8%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||||| || |||| || | || | || ||||||||| |||||||||| || Sbjct 22872 TGCTCTTCAGTGAGTGTCGAGGTGGGCTGACAATTATACTTTGAACAAATTAGAGTACTC 22931 Query 100 AAAGCAGGCCTTT--------GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGT 150 ||||| || || ||| ||||| | |||||||||||||||||| || | Sbjct 22932 AAAGCGGG--TTCAAAATGCCGCTTGAATATTTCGTGCATGGAATAATAGAATATGATCT 22989 Query 151 GCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATA 201 |||||||||||||||||||| || | | | |||||||||| |||||||| Sbjct 22990 -CGGTTCTATTTTGTTGGTTTTCAGAACTCAGAGGTAATGATTATTAGGGATA 23041 >SEQ65821 Length=281 Score = 82.4 bits (90), Expect = 1e-13 Identities = 103/137 (75%), Gaps = 11/137 (8%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGG--GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGT 97 ||| ||||||| | |||| || | | ||| | |||||||||||| ||||||||||| Sbjct 135 TGCACTTCACTTG-TGTGTCGAGATGGGCCGACAATTTTACTTTGAACAAATTAGAGTGC 77 Query 98 TCAAAGCAGGC------CTTTGCTCGAATACAT-TAGCATGGAATAATAGAATAGGACGT 150 ||||||| ||| |||| ||||| | |||||||||||||||||| || | Sbjct 76 TCAAAGCGGGCTCAAAATGCTGCTTGAATATTTCGTGCATGGAATAATAGAATATGATCT 17 Query 151 GCGGTTCTATTTTGTTG 167 |||||||||||||||| Sbjct 16 -CGGTTCTATTTTGTTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914585360832