Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20virginiensis_20[genbank_20GCA_5F002245475.1_202017-08- 10] 67,159 sequences; 855,081,797 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value SEQ54322 138 2e-30 >SEQ54322 Length=718321 Score = 138 bits (152), Expect = 2e-30 Identities = 101/117 (86%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || |||||||| |||| ||||||||| ||||||| ||||||||||| Sbjct 379587 CTATTTAGCAGGCTAGAGTCTCGTTTGTTACCGGAATTAATCAGACAAGTCACTCCACCA 379646 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||| ||||||||| ||||||||| || ||| | |||||||| Sbjct 379647 ACTAAGAACGGCCATG---CACCACCCACCGAATCAAGATAGGGCTGTTAATCTGTC 379700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796281599679