Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq59 167 3e-39 >seq59 Length=7018 Score = 167 bits (184), Expect = 3e-39 Identities = 177/226 (78%), Gaps = 7/226 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| ||||| |||||| |||||||| |||||| | Sbjct 1633 GTACAAAGGGCAGGGACGTAATCAACGTAAGCTT-ATGACTTACGCTTACTGGGAATT-C 1576 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 || ||| | | || |||||||| | ||||| | ||||| ||||| | || Sbjct 1575 CTGGTTCACGGGGAATAATTGCAAGCCCCGATCCCTACCACGAAAGGGGTTCAACGGGTT 1516 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||||| | || | || || ||| |||||||||||||||||| Sbjct 1515 ACCCGAGCCTCTCGGCCA--GAGAAA-ACACGCTGATCCTTTCAGTGTAGCGCGCGTGCA 1459 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 1458 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 1414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749897432440