Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq59 84.2 1e-14 >seq59 Length=7018 Score = 84.2 bits (92), Expect = 1e-14 Identities = 90/118 (76%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAA-CATCGCC 59 |||| |||| |||||||||||||| ||| | || ||||| || |||| || | | Sbjct 1104 GAACTCAAAAACTTTGATTTCTCGGAAGCTTCCCGCAGAGTCGTAAAAATAAACAACTGC 1045 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| |||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 1044 GGATCGCTAGTTAGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277646712240