Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq59 237 3e-60 >seq59 Length=7018 Score = 237 bits (262), Expect = 3e-60 Identities = 205/250 (82%), Gaps = 7/250 (3%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT----GCTCGAATACATTAGCA 129 ||||||||||||||||||||||| ||||||||||| || ||| ||||| ||| Sbjct 738 TTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCTGTTAAAAGCTTGAATATTCGTGCA 797 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTT-TCTAGGACCGCCGTAATG 188 |||||||||| ||||||| || || |||||||||||||||| || | || | ||||| Sbjct 798 TGGAATAATAAAATAGGAAGT-CGTTTCTATTTTGTTGGTTGTCGGAAATCGACTTAATG 856 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||| ||||||||| | |||||||| | ||||||||||||||||||| Sbjct 857 ATTAATAGGGACAGTCGGGGGCATTAGTATTCAGACGACAGAGGTGAAATTCTTGGACCG 916 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 ||||||||||||||||||||||| || ||||| |||||||||||||||| |||||| Sbjct 917 TCTGAAGACTAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGA 975 Query 309 AAGTTAGGGG 318 ||||||| || Sbjct 976 AAGTTAGAGG 985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 912558586368