Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq59 255 9e-66 >seq59 Length=7018 Score = 255 bits (282), Expect = 9e-66 Identities = 209/249 (84%), Gaps = 9/249 (4%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 1477 TCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC-TC 1419 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-----CAGC-CACCAACCA 129 || || | | ||| || || | ||||||||||||||| || | || || | Sbjct 1418 AATCT-CGTGTAGCTAGACGCTACCAGTCCCTCTAAGAAGAATTTTCAACGCAAAAAAAA 1360 Query 130 TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 | | | || |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 1359 T-GACATTGAAACTATTTAGCAGGACAGAGTCTCGTTCGTTATCGGAATTAACCAGACAA 1301 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| | Sbjct 1300 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCGAGAAAGAGCTCT 1241 Query 250 CAATCTGTC 258 ||||||||| Sbjct 1240 CAATCTGTC 1232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794572173096