Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq59 87.8 3e-15 >seq59 Length=7018 Score = 87.8 bits (96), Expect = 3e-15 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 || |||| ||| ||||| |||||||||||||| || |||||||| |||||||||||||| Sbjct 6111 TGACTGATCAGTCAGTGGTGCGAAGCTACCATCCGCCGGATTATGCCTGAACGCCTCTAA 6170 Query 105 GTCAGAATCCATGCCAGA 122 | |||||||| | | ||| Sbjct 6171 GGCAGAATCCGTTCTAGA 6188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 816909543424