Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq59 370 3e-100 >seq59 Length=7018 Score = 370 bits (410), Expect = 3e-100 Identities = 396/511 (77%), Gaps = 13/511 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| || || | || | | ||| || | || ||||| | ||||||||| Sbjct 507 GTACTCATTCCGATAACCGGGCCTCGGATGAGTCCGGCTTCGTTATTTTTCGTCACTACC 448 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 || || ||||||||||||||| |||||||||||||||| || ||||||||||| Sbjct 447 TCGGTCTGCGACCATTGGGTAATTTGCGTGCCTGCTGCCTTCCTTAGAAGTGGTAGCCGT 388 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||| || Sbjct 387 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTCAAAACCACTGT 328 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 ||| |||| | || |||| ||||||||||||| | || ||| || |||||||| Sbjct 327 GGGCGTCTATGCCACAGTCGACAGTTGATAGGGCACACCTTAGAAGGACATGTCGCCGGC 268 Query 240 TCAAGGCCATGCGATTCGTTAA-GTTATTATGAATCACCAAGG---AGCCCCGAAGGGCG 295 || |||||||||| | || |||||| || ||||||||| | ||||| | | Sbjct 267 GTAAAGCCATGCGATCTGCAAATGTTATTCAGAGTCACCAAGGTATACAGCCGAA-GCTG 209 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCG-AAG-TCGGGGTT-TTTAGCATGTATT 352 || | |||| ||||||||| || || | || ||| || || || ||| ||||||||| Sbjct 208 TTTGGTTTTGGTCTAATAAAAGCATCCTTCACGTAAGTTCAGGATTGTTTCGCATGTATT 149 Query 353 AGCTCTAGAATTACCACGGTTATCCATGT-AGTAAGGTACTATCAAATAAACGATAACTG 411 ||||| ||||||||| | |||||||| || | | || | |||| | || | | || Sbjct 148 AGCTCCAGAATTACCGCAGTTATCCAAGTAACTGAG--AATATCCAGTATATTAGGTGTG 91 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 |||||||||||||||||| ||||||| || | | |||| ||||||||||||||||||| Sbjct 90 ATTTAATGAGCCATTCGCGGTTTCACCTTA-ATAAGGCTTGTACTTAGACATGCATGGCT 32 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGC 502 ||||||||||||||||||||||||||||||| Sbjct 31 TAATCTTTGAGACAAGCATATGACTACTGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1506040743936