Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq156885 105 3e-17 >seq156885 Length=8581 Score = 105 bits (116), Expect = 3e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 349050 TGGGCTTCTTCATCTTGGGCGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGG 349109 ||||| | | || ||||| | ||| | || |||||| |||| | |||| ||||||| Sbjct 3497 TGGGCGTGCTGATTTTGGGGGAGGCATTGATAATCTCTTTGATGCGAGGCACACCCAGGG 3438 Query 349110 TCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGG 349169 | | |||| ||| || || ||||||||||| ||||||| |||||||| ||||||| || Sbjct 3437 TGATGTTCATGGAGGCCACACCGGCAAAGTGAAAGGTCTTGAGGGTCATCTGCGTGCCGG 3378 Query 349170 GCTCGCCGATGCACTG 349185 |||| |||||| |||| Sbjct 3377 GCTCACCGATGGACTG 3362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2076842030707568