Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq256083 86.0 1e-11 >seq256083 Length=796 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 196163 CAGATGCGCTTCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTG 196222 || |||||||| || |||| || ||||| ||| || | |||||||| || || ||| | Sbjct 638 CAAATGCGCTTTGACTTGCAGGAAGGATTTCCGGTGCTTACCACGAAAAAGCTGCATTTA 697 Query 196223 CGTTCCATCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTG 196282 || ||||||||||| ||| ||||||| | | || || |||||||| || || Sbjct 698 AAATCGATCATTCATGAGCTGTTGTGGTTTTTACAAGGTGATACCAACATTGCCTATCTC 757 Query 196283 AATGACAACGGTGTCTCTATCTGGAACGAGTGGGC 196317 || | ||||||| || |||||| | || ||||| Sbjct 758 AACAAGCACGGTGTTTCCATCTGGGATGAATGGGC 792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 768758906483520