Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_032982.1 Length=11670 Score E Sequences producing significant alignments: (Bits) Value seq42553 84.2 2e-12 >seq42553 Length=2057 Score = 84.2 bits (92), Expect = 2e-12 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 6725 AAGGAGAGAGAATTGAAGATCATTGGGCGGTTTTTTGCACTGATGACATGGAAACTTAGG 6784 ||||||||||| |||| | |||| | |||||||| || ||| | ||| | ||| | Sbjct 602 AAGGAGAGAGAGATGAAAAGGGTTGGAAGATTTTTTGCTCTCATGTCCTGGGATCTTCGA 543 Query 6785 GAATACTTTGTGTTCACTGAGTACTTGATAAAAACTCATTTCGTCCCCTTGTTCTCGGGA 6844 || |||||||| |||| |||||| | || ||| || ||||||||||||||| ||| Sbjct 542 GAGTACTTTGTCCTCACAGAGTACCTCATCAAAGAGCACTTCGTCCCCTTGTTCAAAGGA 483 Query 6845 TTGACCATG 6853 || || ||| Sbjct 482 TTAACAATG 474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37107920692416