Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_033705.1 Length=11731 Score E Sequences producing significant alignments: (Bits) Value seq110009 80.6 2e-11 >seq110009 Length=642 Score = 80.6 bits (88), Expect = 2e-11 Identities = 143/209 (68%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 6417 ACAATTTTTATCTGATATAGATGTGAATGGACTGGCACAAGATGATTTAGTCATCGGTCT 6476 |||||||||| || || | | ||||| ||| || | || | | || || || || Sbjct 328 ACAATTTTTACAAGAAGTAAACGACAATGGTCTGCCAGATGAGTCTCTTGTAATAGGACT 387 Query 6477 CAAAGGTAAAGAAAGAGAGGTCAAACGGGTTGGACGATATTTTTCATTGATGTCCTGGAA 6536 | |||||||| | ||| | ||| || | ||| ||| || | | ||||||||| Sbjct 388 CCGTGGTAAAGAGCGCGAGATGAAAAGGATAGGAAGATTCTTCGCCCTAATGTCCTGGGC 447 Query 6537 CCTAAGACTATATTTTGTTTTAACTGAATTTCTTATTAAACGATATTACGTTCCCTTATT 6596 | | || |||||||||||| || ||||| | || ||| | || ||||| ||||| Sbjct 448 CTTGCGAGAATATTTTGTTTTGACCGAATTATTGATAAAAAACTTTTTTGTTCCTTTATT 507 Query 6597 TAGTGGATTGACAATGGCAGATGATTTTA 6625 | |||| | |||||||| |||||| ||| Sbjct 508 TGATGGACTAACAATGGCCGATGATCTTA 536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37302486891680