Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1445 84.2 4e-14 >seq1445 Length=4310 Score = 84.2 bits (92), Expect = 4e-14 Identities = 144/207 (70%), Gaps = 13/207 (6%) Strand=Plus/Plus Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 |||| |||| ||||||||||| | |||||| ||||| ||| |||| ||| || |||||| Sbjct 4008 AGGTTTGTGGTGCCCTTAGATATCCTGGGCTGCACGAGCGATACAATGAAAGTACCAACG 4067 Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 || || ||| | | | |||| |||||| || | || | || || |||| ||||| Sbjct 4068 TGT--ATTTCCTAGACAGATTGGTCCGGGTAAACTGCTGAACCACTTTCATGCTTGGGAT 4125 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 | | | || || || |||| | ||| || | ||| | | |||| | | | Sbjct 4126 TGTGAACTGAAA------CTGTTCA--CATGAA---CTTGGAAGTGTGAGTCAATAACTC 4174 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 || |||||| ||||||||| ||||||| Sbjct 4175 GCATTGATTGCGTCCCTGCTCTTTGTA 4201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945329185280