Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq41982 500 7e-137 seq91934 325 3e-84 >seq41982 Length=5201 Score = 500 bits (554), Expect = 7e-137 Identities = 1224/1851 (66%), Gaps = 27/1851 (1%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || || || || ||||| || || | || ||||| | ||| ||||||||||| Sbjct 3361 ATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCCGGT 3302 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 ||| | ||| || ||| ||||||||||| || || | ||||| | || || || || Sbjct 3301 CTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGGTTC 3242 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 |||||||| ||||| ||||||||||| ||||||||| || |||||||| || ||||| Sbjct 3241 AGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGCCAT 3182 Query 65257 GTCAATGATACGACGTCCCG-ATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| | | | | || | |||||||| || ||||| || || ||| | || Sbjct 3181 TTGAATAGTG-GTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATCTT 3123 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 | ||||| || || ||| | || | || || ||| | |||||| | || ||| Sbjct 3122 TGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTCATTT 3063 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||| | | | || | | || || | ||| ||| |||||| | | || Sbjct 3062 CGTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATATTGA 3003 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 | || || || || ||||| | | ||| || ||||| || || ||||| |||||| Sbjct 3002 ATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGATTCAT 2943 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 | ||||| | ||||| || ||||| ||||| ||||| || || | | ||| || |||| Sbjct 2942 TATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAATTTC 2883 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTTTATC 65613 | | || | | || || || | ||| || ||||||||||| ||||| Sbjct 2882 GTACACCATGCTGTTTGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTAG--- 2826 Query 65614 GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673 || | | ||||||||| | ||| || | || |||| |||| | ||| | Sbjct 2825 ---GAGTTTTATT--CCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGG 2771 Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAA 65733 || | || || || || | || | || ||| || | || | |||| || | Sbjct 2770 ATAAGTTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATA 2711 Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793 |||||| || |||||||| || |||| | | |||| ||||| ||||| || | Sbjct 2710 ATAAATAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAA 2651 Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 || ||| | | || |||||||| ||||| || || || || || || ||||||||||| Sbjct 2650 ACGCATTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACG 2591 Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913 | ||| || || ||||| || | ||| || | || || || || || || | Sbjct 2590 TAGATTAGATTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAG 2531 Query 65914 ATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACG 65973 ||| || | || | | | | |||| | || || || ||||| Sbjct 2530 ATTTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAA-TGTTTTT---- 2476 Query 65974 ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGC 66033 || || || ||||||| | |||||| | || || | || || || || Sbjct 2475 -TCAGGCGT---------CACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGC 2426 Query 66034 TATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGT 66093 |||||| || || |||| |||||| |||||||| || |||| |||||||| || || Sbjct 2425 TATCTCATCGGGTGCGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGT 2366 Query 66094 GCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153 ||| | ||| || || |||||||| ||||| || ||||||||||||| |||||| ||||| Sbjct 2365 GCCAATATTTTGCTGGTTACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGT 2306 Query 66154 GCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACG 66213 || || || ||||| | ||||| ||||| ||||||||| | ||||| || ||||| Sbjct 2305 ACCTGTTTCTACTTGAGCTTCAATTATGGCAAACCAAAGAGCCTGGGCCTTGACGGTACG 2246 Query 66214 TACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATAC 66273 || | |||| ||| || | || | | |||||| ||||||| || Sbjct 2245 GTTTGCTTTGCCTTCATTTTCATACTTGGTATACAATTCTTCGAATTCCGCACCCCAAAC 2186 Query 66274 TTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTAC 66333 ||| ||||| ||||| ||||| |||||||| | ||||||||| |||| | |||||| Sbjct 2185 TTCCTGCAGACCAGGACATTTGTGGGGACACATTAACGACCAATCTCCATTTTCTTCTAC 2126 Query 66334 ACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTC 66393 | |||||| | ||| |||||||| ||||| ||||| ||||| | |||| ||||| Sbjct 2125 TCTTTTCATAAACAAATCGGGTATCCACAGGGCATAGAATAGATCTCTAGCTCTGTGCTC 2066 Query 66394 CTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTC 66453 || ||||| |||||| || || | || ||||| || || | |||||| || || Sbjct 2065 TTCCTTGCCGGTATTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTC 2006 Query 66454 CAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGAC 66513 || || ||||| || | || |||||||||||| ||||| || || ||||| || || Sbjct 2005 CAAATAAATGGCAAATGCTCCTGGACGTTTGCCGCCGCCTTGATCTACATAGCGGGCAAC 1946 Query 66514 ATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGAT 66573 |||||| || || | | ||| || || || || || || |||| || || || ||||| Sbjct 1945 ATTGTTAAACACCCTAAGCATGGGCACCAGTCCATTTGAGGTGCCGTTAGTACCATCGAT 1886 Query 66574 GGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGA 66633 || | || |||| ||| ||| || || | ||||||||||| || | || || Sbjct 1885 GGAAGTGCCCTTGGCCCTTATGCAGTGCACGTTAATGCCAATACCACCAGCAGATTTGGA 1826 Query 66634 GATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGT 66693 || || || | |||||| | ||| || || ||||| || ||| || ||||| Sbjct 1825 AATCATGGCGCATTGTTCCACTGACTTGAAAATACCTTCAATAGAATCAGCCACCATGGT 1766 Query 66694 CAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGT 66753 || ||| |||| || | ||| ||| || || || || | || | ||||| | Sbjct 1765 CAAAAGGAAGCACGATGACAATTGTGGTCGCGGGGTAGCAGCAGCAAACAAAGTGGGCGA 1706 Query 66754 AGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTT 66813 || || ||||| ||| | ||||| | || || || |||||| | | ||| |||| Sbjct 1705 GGCATGTGTAAAATAACGCTCAGACAACAAGTTATAAGTTTCGATGGCCGAATCTATGTC 1646 Query 66814 TTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCG 66873 || ||||| || || | || || ||| | | | || || | ||| || | | Sbjct 1645 ATCTCCATGTATACCTATAGCTACTCTCATTAACATATGCTGTGGTCTTTCAACAATCTT 1586 Query 66874 ATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | | || || | || || ||||| | ||||| ||||||| ||||| || Sbjct 1585 ACCATTCATTTTCAGCAAATAGGATCTCTCCAGTGTCTTGAATCCAAAATA 1535 >seq91934 Length=4437 Score = 325 bits (360), Expect = 3e-84 Identities = 511/726 (70%), Gaps = 9/726 (1%) Strand=Plus/Plus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| ||||| || || ||||| || || || || ||| | || ||||| | |||| Sbjct 2865 AGGCTGAAGCATCTTTTTGGACTGTAGAAGAAGTAGATCTCTCTAAAGATAATTCGGACT 2924 Query 61166 GGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCC 61224 |||| | | ||| | ||| | | || || |||||| |||| |||||||| Sbjct 2925 GGGAAAAACTCACCGA-CAATGAGCGTTACTTTATCTCACATGTTCTGGCCTTCTTTGCT 2983 Query 61225 GCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTG 61284 ||||| || ||||| |||||||| ||| | | |||||||| | || ||||| ||||| Sbjct 2984 GCTTCCGATGGTATTGTCAATGAAAATCTTGTTGAACGTTTTTCCCAAGAGGTACAAGTT 3043 Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344 | ||||| || |||||||| || ||||| ||||||||||| ||||| ||||| || ||| Sbjct 3044 ACAGAGGCACGCTGTTTCTATGGTTTCCAAATTGCCATGGAAAATGTACACTCTGAAATG 3103 Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAAT 61404 || ||| || | ||||| | ||||| | || || | |||| || | || ||| Sbjct 3104 TATAGTATTTTGATCGACAGCTACATTAAAGATCGCGAACAACGCGATTATCTCTTTAAT 3163 Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC 61464 ||||| || ||||| || || || ||||| || || |||||||| | |||||| | Sbjct 3164 GCCATTGAAACGATGCCAGCTGTTAAGCGCAAGGCCGATTGGGCAATGTCTTGGATTGGC 3223 Query 61465 AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524 | | |||| | ||||||||||| | | |||||||| | || ||||| | || Sbjct 3224 TCAAAATCGGCCAATTTTGGTGAACGCATTATTGCATTTGCCGCTGTGGAGGGCATTTTC 3283 Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584 |||||||| ||||| | || |||||| | ||||||||||| |||||||| || || Sbjct 3284 TTCAGTGGCAGTTTTGCTTCGATATTTTGGCTAAAGAAACGTGGTCTTATGCCTGGCCTT 3343 Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644 || ||| |||||||||||| || || |||||||| | ||||||||||||||||| || Sbjct 3344 ACATTCTCCAATGAGTTGATTTCTCGTGACGAGGGTTTACATTGTGATTTTGCTGTGTTA 3403 Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATTGTTC 61702 | || |||| || | | | ||||| | || ||| | | || || | Sbjct 3404 ATGTTTAAAC---ATTTAATACAACGTCCCAGCCG--TGAGAGAATAACCGAAATAATAA 3458 Query 61703 GTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCG 61762 || || |||| || ||||| || || | || || |||||||||||| | || | Sbjct 3459 CGGAAGCTGTAAAAATTGAACAAGAGTTCTTAACCGAAGCTTTGCCCGTCAATTTGATTG 3518 Query 61763 GCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG 61822 ||||||||||| | | |||||| | |||||||||||||| || || ||| |||| || | Sbjct 3519 GCATGAATTGTAAATTGATGTCGGAATATATTGAATTTGTAGCTGATCGTTTGTTAGTTG 3578 Query 61823 ATTTGG 61828 | |||| Sbjct 3579 AATTGG 3584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396610992946400