Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4065 107 2e-18 seq2351 89.7 4e-13 >seq4065 Length=69253 Score = 107 bits (118), Expect = 2e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 ||||| | || || ||||| ||||| || || || || || || ||| | ||||| | Sbjct 27592 CATGTACTTGCCTTTTTTGCTGCTTCAGATGGCATTGTGAACGAAAATCTCGTGGAAAGG 27651 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| || ||||| ||| | | || ||||| ||||| || |||||||||||||| ||| Sbjct 27652 TTCAGCCAAGAGGTACAAATACCCGAAGCGCGGTGTTTTTATGGCTTCCAGATTGCAATG 27711 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 || ||||| || || || |||||| | ||||||||||| ||||| Sbjct 27712 GAAAATGTGCATTCAGAAATGTACTCGTTACTCATCGATACTTACAT 27758 >seq2351 Length=162851 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 66313 CCAATCACCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 |||| |||||| || ||| ||||| ||| || | |||||| ||||| ||||| ||| Sbjct 160799 CCAAACACCAT--TGCTCTCAACACGCTTCATGAACAAATCAGGAATCCAAAGGGCATAG 160742 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTC 66429 |||||||| || |||| |||||| | || ||| | ||| ||| || | ||||| Sbjct 160741 AAGAGATCACGAGCTCTGACCTCCTCCTTCCCTGTGTTCTTTTT-CAAATCTAAAAACTC 160683 Query 66430 AAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 |||||| || | |||||| ||||||| ||| ||||| || Sbjct 160682 AAAGATATCAGAATGCCACGGTTCCAAGTAAATGGCAAA 160644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397524895677440