Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq29438 149 3e-33 seq38565 143 1e-31 seq665 143 1e-31 seq53651 138 5e-30 seq44071 138 5e-30 seq46543 120 1e-24 seq26189 116 2e-23 seq55731 111 7e-22 seq40965 93.3 2e-16 >seq29438 Length=261 Score = 149 bits (164), Expect = 3e-33 Identities = 105/120 (88%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 55 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 114 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 115 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 174 >seq38565 Length=38295 Score = 143 bits (158), Expect = 1e-31 Identities = 109/129 (84%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| || ||||||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 20217 GAGCACAGATGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 20276 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 20277 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 20336 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 20337 TAGGGGCGA 20345 >seq665 Length=588 Score = 143 bits (158), Expect = 1e-31 Identities = 109/129 (84%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| || ||||||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 192 GAGCACAGATGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 133 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 132 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 73 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 72 TAGGGGCGA 64 >seq53651 Length=66294 Score = 138 bits (152), Expect = 5e-30 Identities = 106/126 (84%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| || ||||||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 16021 GAGCACAGATGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 15962 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 15961 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 15902 Query 675 TAGGGG 680 |||||| Sbjct 15901 TAGGGG 15896 >seq44071 Length=3925 Score = 138 bits (152), Expect = 5e-30 Identities = 108/129 (84%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| || || |||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 985 GAGCACAGATGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 926 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 925 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 866 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 865 TAGGGGCGA 857 Score = 136 bits (150), Expect = 2e-29 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 1771 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 1712 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 1711 ATTACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 1652 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 1651 AGAGAGTTCAAGAGTACGTGAAA 1629 >seq46543 Length=98230 Score = 120 bits (132), Expect = 1e-24 Identities = 104/129 (81%), Gaps = 4/129 (3%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| || ||||||||||||||||||||||||||||||||| ||| |||| ||||| Sbjct 7976 GAGCACAGATGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGAG 7917 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||| |||||| | | |||| Sbjct 7916 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAA----ATCGTCGGAACTAGGTA 7861 Query 675 TAGGGGCGA 683 ||| ||||| Sbjct 7860 TAGAGGCGA 7852 >seq26189 Length=591 Score = 116 bits (128), Expect = 2e-23 Identities = 110/137 (80%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 ||||||||||||||| || | ||| ||||| | ||| |||||| |||||| | | Sbjct 253 TGTTTGGGAATGCAGTGTCAAGTTGGCAGGTATTTGTCTGCTAAAGTTAAATACAGAGTA 194 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 193 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 134 Query 165 GTTAAAAAGCACGTGAA 181 || ||| || || |||| Sbjct 133 GTGAAATAGAACCTGAA 117 >seq55731 Length=213 Score = 111 bits (122), Expect = 7e-22 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 136 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 77 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 76 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 17 Query 160 AGAGAGTTAAAAAG 173 |||||||| || || Sbjct 16 AGAGAGTTCAAGAG 3 >seq40965 Length=11551 Score = 93.3 bits (102), Expect = 2e-16 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| || ||||||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 8376 GAGCACAGATGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 8435 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 ||||| ||| |||||| || |||| ||| Sbjct 8436 GAAACCCTGATGGAGGACCGTAGCGATTC 8464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078711948950