Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq44071 89.7 2e-16 seq58624 87.8 8e-16 >seq44071 Length=3925 Score = 89.7 bits (98), Expect = 2e-16 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| ||||||||||| Sbjct 1995 GGAAAAGAAACTAACAAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAAGAGCCCAGCA 1936 Query 61 CCGAATCCC 69 | ||||||| Sbjct 1935 CTGAATCCC 1927 >seq58624 Length=315949 Score = 87.8 bits (96), Expect = 8e-16 Identities = 82/102 (80%), Gaps = 3/102 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| || |||||||| Sbjct 16628 GGAAAAGAAACTAACTAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAATAGCCCAGCA 16687 Query 61 CCGAATCCC-CGCCCCGCGGTGGGGCGCGGGACATGTGGCGT 101 | ||||||| || | | | || ||||||| |||||| || Sbjct 16688 CTGAATCCCGCGGTCGTC--TCGGTCGCGGGAGATGTGGTGT 16727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230270294160