Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq33688 342 9e-92 seq6863 288 2e-75 seq28829 255 1e-65 seq47777 246 5e-63 seq52440 228 1e-57 seq4406 215 9e-54 seq45020 140 6e-31 seq57831 107 3e-21 seq12715 77.0 6e-12 >seq33688 Length=411291 Score = 342 bits (378), Expect = 9e-92 Identities = 226/249 (91%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 368544 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTTT 368485 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 368484 TGATGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGAC 368425 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 368424 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 368365 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||||| ||||| | || ||| || |||||||||||||||||| Sbjct 368364 TGTGGTAACTTTTCTGGCTCCTCTTG-CTAAAAACTCTTTATACTAAAGGATCGATAGGC 368306 Query 272 CACACTTTC 280 | ||||| Sbjct 368305 CGTGCTTTC 368297 >seq6863 Length=273205 Score = 288 bits (318), Expect = 2e-75 Identities = 200/226 (88%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 55 GTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCT 114 |||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 130353 GTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCT 130412 Query 115 TACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGT 174 | |||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 130413 TGGCGAATTTTGCTTCGCAATGATAAGAAGAGCCGACATCGAAGGATCAAAAAGCAACGT 130472 Query 175 CGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 130473 CGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTA 130532 Query 235 TAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | | || ||| || |||| |||||||||||||| ||||| Sbjct 130533 TTG-CTAAAAACTCTTTATACTATAGGATCGATAGGCCGTGCTTTC 130577 >seq28829 Length=249 Score = 255 bits (282), Expect = 1e-65 Identities = 183/211 (87%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 83 GTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA 142 ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct 1 GTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGA 60 Query 143 AGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCC 202 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 61 AGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCC 120 Query 203 AGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGA 262 ||||||||||||||||||||||||| |||||| || | ||| | || | ||||| Sbjct 121 AGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGA 180 Query 263 TCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||| ||||| | |||||| ||| ||||||| Sbjct 181 TCGTGAGGCCCCGCTTTCACGGTCTGTATTC 211 >seq47777 Length=7141 Score = 246 bits (272), Expect = 5e-63 Identities = 150/159 (94%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 1695 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTTT 1754 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| Sbjct 1755 TGATGGGTGAACAATCCAACGCTTGGCGAATTTTGCTTCGCAATGATAGGAAGAGCCGAC 1814 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 ||||||||||||||||||||||||||||||||||||||| Sbjct 1815 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 1853 >seq52440 Length=111991 Score = 228 bits (252), Expect = 1e-57 Identities = 140/149 (94%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| Sbjct 80282 TAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAA 80223 Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 80222 CAATCCAACGCTTGGCGAATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATC 80163 Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGC 191 ||||||||||||||||||||||||||||| Sbjct 80162 AAAAAGCAACGTCGCTATGAACGCTTGGC 80134 >seq4406 Length=4040 Score = 215 bits (238), Expect = 9e-54 Identities = 166/194 (86%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| Sbjct 3787 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCATCTCACGTTCCTCATTAC 3728 Query 95 TGGGTGAACAATCCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||| ||| | | || | || || ||||| |||||| |||| Sbjct 3727 CGGGTGAACAATCCAACACTTCGTAACATATACA-CTACG--ATGATCAGAAGAGACGAC 3671 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||| ||||||||||| |||||||||| |||||| |||| |||||||||||||||| Sbjct 3670 ATCGAAGAATCAAAAAGCAGAGTCGCTATGATCGCTTGCCTGCTACAAGCCAGTTATCCC 3611 Query 212 TGTGGTAACTTTTC 225 |||||||||||||| Sbjct 3610 TGTGGTAACTTTTC 3597 >seq45020 Length=5092 Score = 140 bits (154), Expect = 6e-31 Identities = 86/92 (93%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 2917 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTTT 2976 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATT 123 | ||||||||||||||||||||| |||||| Sbjct 2977 TGATGGGTGAACAATCCAACGCTTGGCGAATT 3008 >seq57831 Length=2915 Score = 107 bits (118), Expect = 3e-21 Identities = 78/89 (88%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||||| | |||||||||||||||||||||||||||| Sbjct 89 TACTGAGCAGTATTACTATCGCAACGACGAGCCATCAGTAGGGTAAAACTAACCTGTCTC 30 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCC 88 | ||||||||||||||||||||||||||| Sbjct 29 ACGACGGTCTAAACCCAGCTCACGTTCCC 1 >seq12715 Length=1179 Score = 77.0 bits (84), Expect = 6e-12 Identities = 65/79 (82%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 202 CAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261 ||||||||||||||||||||||| |||||||||| | || ||| || |||||||| Sbjct 755 CAGTTATCCCTGTGGTAACTTTTTTGGCACCTCTTG-CTAAAAACTCTTTATACTAAAGG 697 Query 262 ATCGATAGGCCACACTTTC 280 ||||||||||| ||||| Sbjct 696 ATCGATAGGCCGTGCTTTC 678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853886941344