Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3301 178 4e-42 seq30853 75.2 3e-11 >seq3301 Length=52146 Score = 178 bits (196), Expect = 4e-42 Identities = 110/118 (93%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 27 AAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGC 86 ||||| || ||||| ||||| | ||||||||||||||||| ||||| |||||||||||| Sbjct 15075 AAGAGTCCCGTATCGTTATTTTTCGTCACTACCTCCCCGTGCCGGGAGTGGGTAATTTGC 15016 Query 87 GCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCG 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15015 GCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCG 14958 >seq30853 Length=762 Score = 75.2 bits (82), Expect = 3e-11 Identities = 43/44 (98%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1 CATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509493019904