Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_033068.1 Length=2566 Score E Sequences producing significant alignments: (Bits) Value seq49788 102 1e-18 >seq49788 Length=302616 Score = 102 bits (112), Expect = 1e-18 Identities = 182/260 (70%), Gaps = 13/260 (5%) Strand=Plus/Plus Query 1127 TCACTCCTTTCACTAAGCTTGAGAAAATGGGATCAAATAAGTACAAAGCTCCAAGACTTA 1186 |||| |||||||| ||| | || || || ||| | |||||| || |||||| | | | Sbjct 67748 TCACGCCTTTCACCAAGATAGAAAAGGTGAAATCGACTAAGTATAAGGCTCCACGCATGA 67807 Query 1187 TCCAAGCACGCCATCCAACATTCAATATCGCTTATGGATGCTACATTAAACCACTCGAGC 1246 | |||||| | || ||| ||||| || | || ||| | |||||||| || | ||| Sbjct 67808 TTCAAGCAAGAGATATAACCTTCAACATAGAATACGGAAGATACATTAAGCCTTTAGAGT 67867 Query 1247 GTG--CTAACAAACAC-------AAGCTACAA-TTCGGCAAAGGCACTTATGACGAGATT 1296 |||||| ||| |||| |||| ||||| ||||||| ||||||||||| Sbjct 67868 TAAAACTAACACACAGTAGTAATAAGC-ACAACTTCGGGAAAGGCAACTATGACGAGATC 67926 Query 1297 G-GAGCCAAAATACACAAGCTTTCTCGAAAATACCAATACTACACTGAAGGAGACCATAA 1355 | ||| | || || || || | || |||||| || ||||| |||| ||||||||| Sbjct 67927 GCGAGACGAATTAG-CAGACTAGCACGGAAATACAGGTATTACACGGAAGCAGACCATAA 67985 Query 1356 GACTTTTGACGCACACGTCA 1375 ||| || || ||| |||||| Sbjct 67986 GACCTTCGATGCATACGTCA 68005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8097230501688