Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_033070.1 Length=11145 Score E Sequences producing significant alignments: (Bits) Value seq57646 82.4 5e-12 >seq57646 Length=1202957 Score = 82.4 bits (90), Expect = 5e-12 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 6221 TAAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGCACTTATGTCTTGGG 6280 |||||| ||||| ||||| | ||| | ||| || ||||| | || ||| | ||| Sbjct 1171110 TAAGAGGGAAAGAAAGAGAAATAAAAAGATTAGGTAGATTCTTCTCTCTGATGACATGGC 1171051 Query 6281 AAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACTTTGTACCTCTGT 6340 || |||| ||||| ||||| || |||||||||||||| |||| |||| | | || || | Sbjct 1171050 AACTCAGGGATTACTTTGTAATAACAGAGTATCTTATTAAAATTCACTATATTCCACTAT 1170991 Query 6341 TCAAAGGTCTGACAATGGCAGACGATTT 6368 | ||| | || ||||| || ||||| Sbjct 1170990 TTTCAGGGTTAACTATGGCCGATGATTT 1170963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35524784963724