Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_033103.1 Length=13161 Score E Sequences producing significant alignments: (Bits) Value seq28589 104 2e-18 >seq28589 Length=6593 Score = 104 bits (114), Expect = 2e-18 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 8822 AAATTGAAGAGGGTACAAGGAAATTAGGGCTTATTATCAATAAAGATGAGACCATGCAAA 8881 |||| |||||| | | ||||||||||| ||||| ||||| | |||||| || |||| | Sbjct 2138 AAATCGAAGAGAGAGCGAGGAAATTAGGTCTTATAATCAACAGAGATGAAACTATGCGAT 2197 Query 8882 GTGCAGACTATCTAAACTACGGGAAAGTTCCGGTGGTTAGAGGCAATATAAGAGCGTTAG 8941 |||||| | || | || |||||||| || || || |||| || || || | |||| Sbjct 2198 CTGCAGATTTCCTGAGTTATGGGAAAGTCCCTGTATTTCGAGGAAACATTAGGGGATTAG 2257 Query 8942 AGACTAAGCGGTGGGCAAGGGTGACATGTGTGACAAATGATCAGATACCAACACTTTCAA 9001 ||||||| | ||| || | || || || ||| | |||||||| | || | | | Sbjct 2258 AGACTAAAAGATGGTCACGAGTCACTTGCGTGTCCAATGATCAACTGCCCGGATTAGGGA 2317 Query 9002 ATGTCATGGCCACAGTTTCCACCAATGCTTTGACTGTTGCCCATTACTCTGA 9053 || || || | || || || | ||||| ||||| || | || ||||| || Sbjct 2318 ATATCTTGTCGACTGTATCTTCAAATGCCTTGACAGTCTCACACTACTCGGA 2369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41967640926188