Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_033222.1 Length=9481 Score E Sequences producing significant alignments: (Bits) Value seq37195 107 1e-19 >seq37195 Length=15308 Score = 107 bits (118), Expect = 1e-19 Identities = 243/362 (67%), Gaps = 30/362 (8%) Strand=Plus/Plus Query 6325 TATCAAAGGAAATCTGGTGATGCTGCTACtttttttGGAAATACTATAGTGTTGATGGCT 6384 |||||| | || |||||||||||| | ||||| | | |||||| | | | || ||||| Sbjct 13345 TATCAACGTAAGTCTGGTGATGCTTCAACTTTCTGTCAAAATACCAGATTTTTAATGGCC 13404 Query 6385 ATTTTGGCTACCGTTTATGACTTGACCGATGCTTA---TGGAATGTTTGCCGGTGATGAT 6441 || ||||| | | || || |||| ||| |||||| |||||||| |||||| Sbjct 13405 GTTGCAGCTACAATGTTCAACATGGAGGATGTTTACTTTGGAATATTTGCCGGAGATGAT 13464 Query 6442 AGTTTGTTGTTTA-GTGACGTTAAATTTAATTATGGATATAAAGAACTAGCTGA-----A 6495 |||| ||| | | | ||| || || || ||||| || || | || | Sbjct 13465 AGTTGGTTACTAACGAAACGGGAATTTAAA-----GATATGAACG-CTTGGTGTGCGACA 13518 Query 6496 ATGTTTAATTTGGAATCTAAATTATTAGTTTTTAATT---GGCCAT------ATTTTTGT 6546 |||| ||||| ||||| ||||| |||||| | ||| || |||||||| Sbjct 13519 TTGTTAAATTTAGAATCAAAATT------TTTTAAGTACCGGCGATCAATATATTTTTGT 13572 Query 6547 TCAAAATTTTTGTTAAATGTGGGAGGTAAGTGGAAAGTAGTACCTGATCCTCTGAAGTTG 6606 || |||| ||| ||| ||| || ||| ||| | || ||||||||||| | ||||| Sbjct 13573 TCGAAATATTTTTTACATGATGGTTTTAAATGGCACATAATACCTGATCCTGTTAAGTTA 13632 Query 6607 GTGACAAAATTAGGTAGGTTTGATTTGGTGGATTTTGAACATCGTAAAGAGTATAAAATT 6666 || |||| | ||| | ||||||| || ||||||| ||| | | ||||||| || | Sbjct 13633 CTGGTAAAACTTGGTCGAAGTGATTTGATGAATTTTGACCATGTTGAGGAGTATAGAACT 13692 Query 6667 TC 6668 || Sbjct 13693 TC 13694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30203582139020