Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycopis_20cecrops_20[genbank_20GCA_5F001625245.1_202016-04-21] 60,049 sequences; 728,788,927 total letters Query= NC_033731.1 Length=12548 Score E Sequences producing significant alignments: (Bits) Value seq40018 82.4 6e-12 >seq40018 Length=56561 Score = 82.4 bits (90), Expect = 6e-12 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 6471 TAGATTACGAGAAATGGAACAATCACCAAAGGAAGGAATCAAATGATCCTGTATTCAGAG 6530 |||| || ||||||||||||||| | ||||||| |||| || || | ||| | | Sbjct 43721 TAGACTAGGAGAAATGGAACAATAATCAAAGGAGACAATCCAACAGTCTGATCTTCCGTG 43780 Query 6531 TGATGGGTCAATTTTTGGGAAAGCCTAACTTATTCACTAGGACACATGAGTTTTTCGAGA 6590 | ||| || || ||||| || || ||| | |||||||| || || || |||| Sbjct 43781 TAATGAGTGCGTTCTTGGGGTGTCCGAATTTAATTGAGAGGACACACGAATTCTTTGAGA 43840 Query 6591 AATCGTTGATTTATTATGTTGATAGACCTGATTTGATAAGAGTAGATGAGGAGAATAGAG 6650 | |||||||| |||| |||| ||||||| |||| || ||||| || || | | Sbjct 43841 AGAGTTTGATTTACTATGCCGATAAACCTGATCTGATGAGGGTAGAAGATGATATGCTAT 43900 Query 6651 TTTATTGTCCTGCAGAGTTGGTCGCCTGGGAAGGACAACCAGGAGGAATGGAAGG 6705 | | | ||| |||||| |||| | ||||||| ||| || ||||||| Sbjct 43901 TCAACTCAACTGATAGGTTGGTGTGCTGGAATGGACAACGAGGGGGTTTGGAAGG 43955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40011352008832