Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq6463 187 5e-45 >seq6463 Length=98022 Score = 187 bits (206), Expect = 5e-45 Identities = 217/286 (76%), Gaps = 10/286 (3%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| |||| | | ||| | || ||||||||||| ||||||||||| | Sbjct 4630 TGCTCTTTACTGAGTGTCGAGTCGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 4571 Query 100 AAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| ||| || |||||| |||||||||||| ||||||||| | |||| Sbjct 4570 AAAGCAGGCTACCTTCGCCTGAATACTGCGTGCATGGAATAATGGAATAGGACCT-CGGT 4512 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| | Sbjct 4511 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 4453 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| || ||||||| Sbjct 4452 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAAAG 4393 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||| |||||||||||||||| ||||||||||||| || Sbjct 4392 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 4348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915101240768