Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6903 136 2e-29 seq6463 136 2e-29 seq2614 136 2e-29 >seq6903 Length=36931 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 3673 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 3732 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 3733 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 3792 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 3793 ATAGGGGCGA 3802 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 4116 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 4175 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 4176 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 4235 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 4236 ATAGGGGCGA 4245 Score = 107 bits (118), Expect = 8e-21 Identities = 113/145 (78%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||| | | ||||| ||||||| Sbjct 2849 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 2908 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTA--GAGTGATCGAAAGATGAAAAGCACTTTGG 157 | | ||| || ||||||| | ||||| |||| ||||| ||||||| |||||| Sbjct 2909 A-CGACCA-CGAGTGATAGCGAATAAGTACCCCGTGAGGGAAAGTTGAAAAGAACTTTGA 2966 Query 158 AAAGAGAGTTAAAAAGCACGTGAAA 182 | |||||||| || || |||||||| Sbjct 2967 AGAGAGAGTTCAAGAGTACGTGAAA 2991 Score = 77.0 bits (84), Expect = 1e-11 Identities = 70/87 (80%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG---TGTC-- 462 ||||||||| |||||||||||||||||||||||| || |||||| ||||| |||| Sbjct 3487 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTACGCGAGTCATTGGGACTTGTCGC 3546 Query 463 -AAACCCGTGCGCGTAATGAAAGTGAA 488 | ||| |||||||||||||||| Sbjct 3547 GAGACCTAAAGGCGTAATGAAAGTGAA 3573 >seq6463 Length=98022 Score = 136 bits (150), Expect = 2e-29 Identities = 128/159 (81%), Gaps = 3/159 (2%) Strand=Plus/Minus Query 26 GAAGCTC-CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTT 84 |||| || |||| |||||| |||| ||| || ||||||||||| |||| |||||| | Sbjct 983 GAAGATCTCTTCTTAGAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTC 924 Query 85 CTTCTAAAGCTAAATATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT 143 | ||||| |||||||| | ||| ||||||||||||| ||||||| |||| ||||| | Sbjct 923 CATCTAAGGCTAAATAC-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTT 865 Query 144 GAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 |||||| |||||| | |||||||| || || |||||||| Sbjct 864 GAAAAGAACTTTGAAGAGAGAGTTCAAGAGTACGTGAAA 826 Score = 93.3 bits (102), Expect = 2e-16 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||| |||||||| |||||||||||||| ||| |||| || Sbjct 151 AGAGCGTACACGTTGGGACTCGAAAGATTGTGAACTATGCCTGGTCAGGACGAAGTTAGG 92 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| || |||||| || |||| || || |||| |||||||||||| | ||| Sbjct 91 GGAAACCTTGATGGAGGTCCGTAGCGATTGTGACGTGTAAATCGATCGTCGGAACTGG-- 34 Query 674 ATAGGGGCGA 683 ||| |||||| Sbjct 33 ATATGGGCGA 24 >seq2614 Length=9078 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 7715 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 7656 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 7655 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 7596 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 7595 ATAGGGGCGA 7586 Score = 136 bits (150), Expect = 2e-29 Identities = 118/144 (82%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||| | | ||||| ||||||| Sbjct 8539 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 8480 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 8479 AC-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 8421 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 8420 GAGAGAGTTCAAGAGTACGTGAAA 8397 Score = 77.0 bits (84), Expect = 1e-11 Identities = 70/87 (80%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG---TGTC-- 462 ||||||||| |||||||||||||||||||||||| || |||||| ||||| |||| Sbjct 7901 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTACGCGAGTCATTGGGACTTGTCGC 7842 Query 463 -AAACCCGTGCGCGTAATGAAAGTGAA 488 | ||| |||||||||||||||| Sbjct 7841 GAGACCTAAAGGCGTAATGAAAGTGAA 7815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079768533050