Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6463 217 2e-54 >seq6463 Length=98022 Score = 217 bits (240), Expect = 2e-54 Identities = 222/293 (76%), Gaps = 49/293 (17%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3813 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 3872 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------- 115 | |||| || | |||| |||||| |||||||||||||| Sbjct 3873 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 3930 Query 116 ----------CCAGCCACC--AA--------CCATAGTCGAT-------GG---GGCTAT 145 || |||| | || || | | |||| || | |||| Sbjct 3931 GTAGTAAAAACCCGCCAGCCGAAGCCGGGGGCCTTCG-CGATACCATAAGGTACGCCTAT 3989 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3990 TTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTA 4049 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 4050 AGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 4102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796716704271