Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq6903 477 3e-132 seq2614 172 2e-40 seq3782 152 2e-34 seq3716 120 1e-24 seq10030 116 1e-23 >seq6903 Length=36931 Score = 477 bits (528), Expect = 3e-132 Identities = 323/361 (89%), Gaps = 1/361 (0%) Strand=Plus/Minus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 ||||| | | || ||||||| ||||||| | ||||||||||||||| ||| | Sbjct 6211 TCCGCCTAACCGAGTAAGTAAGGAAACGATGAAAGTAGTGGTATTTCACCGGCGATGTTG 6152 Query 234 CGG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | ||||||||||| |||||||||||| ||| | ||| | | |||||||||||||| Sbjct 6151 CCATCTCCCACTTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACTAGAGTCAAGC 6092 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct 6091 TCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCCCTTGGCAGTGGTTTCG 6032 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6031 CTAGACAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 5972 Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5971 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 5912 Query 473 TTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 5911 TTGCTTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 5852 Query 533 A 533 | Sbjct 5851 A 5851 Score = 150 bits (166), Expect = 6e-34 Identities = 98/106 (92%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 429 GCTACC-TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTT 487 |||||| |||||||||||||| ||||||||||||||||||||||| |||||| |||| Sbjct 8119 GCTACCCTTAAGAGAGTCATA----CTCCCGCCGTTTACCCGCGCTTGCTTGAATCTCTT 8064 Query 488 CACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 8063 CACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 8018 Score = 118 bits (130), Expect = 3e-24 Identities = 98/120 (82%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 6435 CTTTTGCTCTACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 6376 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||| Sbjct 6375 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 6316 >seq2614 Length=9078 Score = 172 bits (190), Expect = 2e-40 Identities = 98/100 (98%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 5884 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTT 5943 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||| Sbjct 5944 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 5983 Score = 125 bits (138), Expect = 2e-26 Identities = 74/77 (96%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2335 GACAGTAGATAGGGACAGTGGGGATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 2394 Query 416 GACGAGGCATTTGGCTA 432 |||| |||||||||||| Sbjct 2395 GACGGGGCATTTGGCTA 2411 >seq3782 Length=5790 Score = 152 bits (168), Expect = 2e-34 Identities = 96/104 (92%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 4343 CTCCCTTAAGAGAGTCACAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCA 4402 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | |||||||||| |||||||||||||||||||||||||| || Sbjct 4403 CGTTGACATTCAAGACACTGGGCAGAAATCACATTGCGTCACCA 4446 >seq3716 Length=5150 Score = 120 bits (132), Expect = 1e-24 Identities = 71/74 (96%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3530 AGTAGAATGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTACATGAC 3471 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 3470 GAGGCATTTGGCTA 3457 >seq10030 Length=14911 Score = 116 bits (128), Expect = 1e-23 Identities = 72/76 (95%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7144 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 7085 Query 421 GGCATTTGGCTACCTT 436 | |||| |||| ||| Sbjct 7084 G--ATTTAGCTAGCTT 7071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635023545568