Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq6463 412 1e-112 >seq6463 Length=98022 Score = 412 bits (456), Expect = 1e-112 Identities = 421/543 (78%), Gaps = 45/543 (8%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 4862 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 4921 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4922 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 4981 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 4982 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 5041 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||| |||||||| |||||| ||||||| || | ||||||| Sbjct 5042 AGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 5101 Query 240 TCAAGG-CCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCCCCGA 289 | ||| || |||||| | |||||||| || ||| ||| || | ||| Sbjct 5102 GCTAGGACCGTGCGATCAGCACAAAGTTATTCAGAGTCATCAAAATAAACGGTG-GACGA 5160 Query 290 AGGGCG----------------TTGGTTTTTTATCTAATAAATACACCCCTTCC----GA 329 | |||| |||| |||| |||||||||| | ||||||| Sbjct 5161 ATGGCGAGCCGCCCGCCACCAATTGG-TTTTGATCTAATAAAAGCGTCCCTTCCATCACT 5219 Query 330 AGTCGGG---GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---G 383 |||||| | ||| |||||| ||||||||||||||||||| |||||||| ||| | Sbjct 5220 GGTCGGGACTCTGTTTTGCATGTCTTAGCTCTAGAATTACCACAGTTATCCAAGTAAATG 5279 Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443 | ||||| ||| ||| ||| |||||| |||||||||||||||||||||| ||| || Sbjct 5280 T-GGGTACAATCTAATGAACCATAACTAATTTAATGAGCCATTCGCAGTTCCACCTTA-- 5336 Query 444 GATT--GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501 ||| || | ||| ||||||||||||||||| |||||||| |||||||| |||||||| Sbjct 5337 -ATTCGGCATGCACTGAGACATGCATGGCTTAACCTTTGAGATAAGCATATAACTACTGG 5395 Query 502 CAG 504 ||| Sbjct 5396 CAG 5398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510237012736