Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8255 91.5 1e-13 >seq8255 Length=582279 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 ||||| ||||| |||||||| ||||| || || ||||| ||||||||| | | || | Sbjct 397895 CATGTCTTGGCATTCTTTGCTGCTTCTGATGGAATCGTTAATGAGAATCTGATTGAGAGA 397954 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| || || || || | | || || ||||||||||| || ||||| |||||||| Sbjct 397955 TTCAGTCAAGAAGTAAAAATTGCTGAAGCACGTTGTTTCTATGGATTCCAAATTGCCATA 398014 Query 61324 GAGAATGTCCACTCGGAGATGTA 61346 ||||| | || || || ||||| Sbjct 398015 GAGAACATTCATTCTGAAATGTA 398037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397515713720240