Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_032971.1 Length=11834 Score E Sequences producing significant alignments: (Bits) Value seq7022 163 2e-36 >seq7022 Length=3540 Score = 163 bits (180), Expect = 2e-36 Identities = 526/800 (66%), Gaps = 35/800 (4%) Strand=Plus/Plus Query 6654 GTTGACCCCAAGTTTGATTTAATTGAAATGATAGCTGACAAGGCTATGTCGCTCATGACG 6713 ||||| || || || ||||||||||||||||| ||||||| |||||||| || || || Sbjct 1468 GTTGATCCTAAATTCGATTTAATTGAAATGATTACTGACAAAGCTATGTCCCTTATAACT 1527 Query 6714 GATGAGCTCCTATCCAAGCTCAGAAGGGGACAAGGGACTGGGAGTTCGACT---GAGAGG 6770 ||| ||| | || | | || || ||| ||| |||| || ||| || || Sbjct 1528 CCTGACCTCATTGATAACTTGATCAGAGG-CAAAGGAGTGGGC--TCTACTATAGACAGA 1584 Query 6771 TCGGTCCTCATTAACTGGCTAAAATCCCCTCATCACGACCCCAAGACCTTCCTT-ATGTC 6829 ||||| ||||| || |||| | || || || ||| ||| | || || Sbjct 1585 TCGGT--------ACTGGTTACAATCGGATTTACATGATCCAAAGGATTTCTTAGATTTC 1636 Query 6830 GATAGACCTATTTGGGTTCCAGGAGAATGAAAGAAGTGTTGGGGTCAAAGAGAAAGAGCG 6889 || ||| || ||| |||| ||| ||| | |||| ||||||||| ||||| || Sbjct 1637 -ATTGACAAATATGGCTTCCCAGAGTCAGAACAATCAGTTGAGGTCAAAGAAAAAGAACG 1695 Query 6890 TGAGCTGAAGATAGAAGCTAGATTGTTTGGAATGATGACCTTCTTCAAAAGAATGTATAT 6949 || || ||||||| || || ||||| | ||||| | |||||| | ||||| | Sbjct 1696 GGAAGGAAAACTAGAAGCAAGGTTATTTGGTTTAATGACTCTTTTCAAACGGATGTACAC 1755 Query 6950 TGTTCTAACTGAAGCACTATTAGCAGAGCACATCCTCCCGTACTTCCCTGAGATCACTAT 7009 ||| |||| || || | || |||||||| || | ||||| || || ||||| || Sbjct 1756 AGTTTTAACAGAGGCTTTGTTGGCAGAGCATATTTTGAAATACTTTCCAGAAATCACCAT 1815 Query 7010 GGTTGACGACGAGATCTCTTTGGATAAAAAGCGACTGAACTTCA---ATTCTAAAAGGTA 7066 | |||| |||||||| |||||||||||||| || || | |||| |||| | Sbjct 1816 GATTGATGACGAGATATCTTTGGATAAAAAACGGATGGAGTTCAACGATTCCTCTTTGAG 1875 Query 7067 CAAGGGGAGATCCCTTTTTACCAGTCTTGACTTCCAGAAATGGAATTCATATATGAGGGA 7126 ||| || || | || || ||| | || || |||||||| || | ||||| || Sbjct 1876 CAA---AAGGTCTTTGTTCACTAGTTTAGATTTTTCAAAATGGAACACAAACATGAGAGA 1932 Query 7127 GTTCGAGACTCGAGGACTGTTTC--GATGTTTAGATCAGCTCTTCGGGTTTATCAATGTC 7184 ||| |||||| ||| |||| ||| || ||||| | || ||||||| ||| Sbjct 1933 AAACGAAACTCGA-GACACTTTCAAAATGATT-GATCAATTGTTTGGGTTTACTAATTGT 1990 Query 7185 TACCAGAGAACTCACGAAATGTTTGACTCATCTTTCATATATCTCTTAAACTCCTCTTAC 7244 | || | || || ||||||||||| | || | ||| ||||| |||| || || Sbjct 1991 TTTCAACGCACCCATGAAATGTTTGATACCTCATGCATTTATCTGCTAAATGGGTCGTAT 2050 Query 7245 ATGCCAAC--AGCAGAGGCGAATGGATTGAAGACAGATATCGG--TGTGG-ACCGTCACT 7299 |||| || | || || || | ||| || | || | || | ||| | | || Sbjct 2051 TTGCCCACTTACCATAGTGGA--GAATTTAAACCTGACTTAGGACTATGGAAAGGACATC 2108 Query 7300 TAGGAGGGATTGAAGGGCTCAGACAAAAGGGGTGGACACTGTGGACCGTGACGTTGATCC 7359 ||||||| |||||||| | |||||||| | ||||| | ||||| ||| | | || Sbjct 2109 TAGGAGGTATTGAAGGTTTAAGACAAAAAAGCTGGACCATATGGACTGTGGCACTCATTT 2168 Query 7360 TTCTCGCAGCTGAGGA-GCTCTCAATCACCTTAAACCTGATGGGGCAAGGGGATAACCAA 7418 | | || | || || ||| | || | | |||||||| ||||| |||||||| Sbjct 2169 TGTTAGCTTCAGAAGATTATCT-TACAACGATTAGGCTGATGGGACAAGGAGATAACCAG 2227 Query 7419 GTACTCCGAGAAATCTTTCC 7438 ||| | |||||||| | ||| Sbjct 2228 GTAATACGAGAAATTTATCC 2247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37749016760152