Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2750283 149 3e-33 seq1227591 136 2e-29 seq713090 136 2e-29 seq2730080 134 6e-29 seq2676571 131 7e-28 seq2622247 131 7e-28 seq31146 113 2e-22 seq491806 109 2e-21 seq243426 109 2e-21 seq1871019 104 9e-20 seq235203 102 3e-19 seq2700619 95.1 5e-17 seq2714755 93.3 2e-16 seq1838940 91.5 6e-16 seq1221344 87.8 7e-15 seq2702958 82.4 3e-13 seq1160617 82.4 3e-13 seq2320401 80.6 1e-12 seq1537191 80.6 1e-12 seq1474923 80.6 1e-12 seq2294054 78.8 4e-12 seq2351853 77.0 1e-11 seq833039 77.0 1e-11 seq1353999 75.2 5e-11 >seq2750283 Length=8957 Score = 149 bits (164), Expect = 3e-33 Identities = 111/130 (85%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||| | |||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 4329 AGAGCACACGCGTTGGGACCCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCAGA 4270 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||| || | | |||||| ||||||||||||| |||| | ||||| Sbjct 4269 GGAAACTCTGGTGGAGGTCCGAACCAGTTCTGACGTGCAAATCGATTGTCAGAGCTGGGT 4210 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 4209 ATAGGGGCGA 4200 Score = 77.0 bits (84), Expect = 1e-11 Identities = 68/83 (82%), Gaps = 3/83 (4%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT--GTC-AA 464 ||||||||| ||||||||||||||||||||||| | ||||||| | |||| ||| | Sbjct 4539 CCCGTCTTGAAACACGGACCAAGGAGTCTAACAAGTGTGCGAGTCTAAGGGTCCGTCGAG 4480 Query 465 ACCCGTGCGCGTAATGAAAGTGA 487 ||||| ||| ||||||||||| Sbjct 4479 ACCCGGAGGCGCAATGAAAGTGA 4457 >seq1227591 Length=456 Score = 136 bits (150), Expect = 2e-29 Identities = 101/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| || Sbjct 323 TTGGGACCCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCTGAGGAAACTCTAGT 382 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| || | | ||| || |||||||||||||||||| | ||||||||||||||| Sbjct 383 GGAGGTCCGAACCAGTTTTGACGTGCAAATCGATCGTCAGAGCTGGGTATAGGGGCGA 440 >seq713090 Length=378 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||| | |||||||| ||||||||||||||||||||||| ||| ||||||||| Sbjct 231 AGAGCACACGCGTTGGGACACGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCAGA 172 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||||||||| |||| || | | |||||| ||||||||||||| |||| | ||||| Sbjct 171 GGAAACTCTGGTAGAGGTCCGAACCAGTTCTGACGTGCAAATCGATTGTCAGAGCTGGGT 112 Query 674 ATAGGGGCGA 683 ||||| |||| Sbjct 111 ATAGGTGCGA 102 >seq2730080 Length=3486 Score = 134 bits (148), Expect = 6e-29 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 |||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| | Sbjct 939 TGGGACCCGAAAGATGGTGAACTATGGCTGGCCAGGACGAAGCCAGAGGAAACTCTGGCG 880 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| || | | |||||| ||||||||||||| |||| | ||||||||||||||| Sbjct 879 GAGGTCCGAACCAGTTCTGACGTGCAAATCGATTGTCAGAGCTGGGTATAGGGGCGA 823 >seq2676571 Length=2317 Score = 131 bits (144), Expect = 7e-28 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||| | |||||||| ||||||||||||| ||||||||| ||| ||||||||| Sbjct 158 AGAGCACACGCGTTGGGACACGAAAGATGGTGAGCTATGCCTGGGCAGGACGAAGCCAGA 217 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||| ||| || | | ||| || ||||||||||||| |||| | ||||| Sbjct 218 GGAAACTCTGGTGTAGGTCCGAACCAGTTTTGACGTGCAAATCGATTGTCAGAGCTGGGT 277 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 278 ATAGGGGCGA 287 >seq2622247 Length=1888 Score = 131 bits (144), Expect = 7e-28 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||| ||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| Sbjct 1300 AGAGTATACGTGTTGGGACCCGAAAGATGGTGAACTAAGCCTGGCCAGGATGAAGCCAGA 1241 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||| || | |||||| | ||||||| ||| |||| | ||||| Sbjct 1240 GGAAACTCTGGTGGAGGTCCGAACAAGTTCTGACATGCAAATAGATTGTCAGAGCTGGGT 1181 Query 674 ATAGGGGCGA 683 ||| ||||| Sbjct 1180 ATATAGGCGA 1171 >seq31146 Length=303 Score = 113 bits (124), Expect = 2e-22 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 582 GGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGT 641 ||||||||||||||| ||| |||||||||||||||||||||||||| || | | || Sbjct 303 GGTGAACTATGCCTGGCCAGGACGAAGCCAGAGGAAACTCTGGTGGAGGTCCGAACCAGT 244 Query 642 TCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||||| |||| | ||||||||||||||| Sbjct 243 TCTTACGTGCAAATCGATTGTCAGAGCTGGGTATAGGGGCGA 202 >seq491806 Length=352 Score = 109 bits (120), Expect = 2e-21 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||| | ||||||||||||||||||||||||||||| || ||| ||||||| | Sbjct 199 AGAGCACTCCCGTTGGGACCCGAAAGATGGTGAACTATGCATGGCCAGGACGAAGCCAAA 258 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||| | | | || | || |||||||||| || | | ||||| Sbjct 259 GGAAACTCTGGTGGAGGTCCTAACCAGTCTCGACGAGCAAATCGATAGTAAGAACTGGGT 318 Query 674 ATAGGGGCGA 683 ||| |||||| Sbjct 319 ATAAGGGCGA 328 >seq243426 Length=325 Score = 109 bits (120), Expect = 2e-21 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||| | |||| |||||||||||||||||||||||| || ||| ||||||| | Sbjct 154 AGAGCACTCCCGTTGCGACCCGAAAGATGGTGAACTATGCATGGCCAGGACGAAGCCAAA 95 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||| | | | || || || |||||||||| || | | ||||| Sbjct 94 GGAAACTCTGGTGGAGGTCCTAACCAGTCTTGACGAGCAAATCGATAGTAAGAACTGGGT 35 Query 674 ATAGGGGCGA 683 ||| |||||| Sbjct 34 ATAAGGGCGA 25 >seq1871019 Length=656 Score = 104 bits (114), Expect = 9e-20 Identities = 94/117 (80%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||||| ||||||||||||||||||||||| |||| ||||||||||||||| |||| Sbjct 483 GTTGGGATCCGAAAGATGGTGAACTATGCCTTGCTAGGACGAAGCCAGAGGAAACGCTGG 542 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 | || | | | |||||| | ||| ||||||| |||| | ||||||||||||| Sbjct 543 TTATGGTCCAAACCAGTTCTGACCTGC-AATCGATTGTCAGAGCTGGGTATAGGGGC 598 >seq235203 Length=324 Score = 102 bits (112), Expect = 3e-19 Identities = 79/94 (84%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 590 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGT 649 ||||||| ||| |||||||||||||||||||||||||| || | | |||||| ||| Sbjct 1 ATGCCTGGCCAGGACGAAGCCAGAGGAAACTCTGGTGGAGGTCCGAACCAGTTCTGACGT 60 Query 650 GCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| |||| | ||||||||||||||| Sbjct 61 GCAAATCGATTGTCAGAGCTGGGTATAGGGGCGA 94 >seq2700619 Length=2650 Score = 95.1 bits (104), Expect = 5e-17 Identities = 92/117 (79%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||| Sbjct 1361 GTTGGGATCCGAAAGATGGTGAACTATGCCTTGGCAGGACGAAGCCAGAGGAAACGCTGG 1420 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 || | | | |||||| | ||| ||||||| |||| | ||||||||||||| Sbjct 1421 GTATGGTCCAAACCAGTTCTGACCTGC-AATCGATTGTCAGAGCTGGGTATAGGGGC 1476 >seq2714755 Length=2947 Score = 93.3 bits (102), Expect = 2e-16 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| ||| ||||||| |||| ||||||||| ||| |||||||||| || || ||| Sbjct 1111 GTTGGAACCAGAAAGATAGTGACCTATGCCTGGCCAGGACGAAGCCAGAGAAAGCTTTGG 1052 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| | | | |||||| ||||||||||||| ||| | ||||||||||||||| Sbjct 1051 TGGTGATCCAAACTAGTTCTGACGTGCAAATCGATTCTCAGAGCTGGGTATAGGGGCGA 993 >seq1838940 Length=640 Score = 91.5 bits (100), Expect = 6e-16 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 |||| |||||||||||||||||||||||||| || | | |||||| |||||||| ||| Sbjct 284 TAGGTAGAAGCCAGAGGAAACTCTGGTGGAGGTCCGAACCAGTTCTGACGTGCAAAGCGA 343 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 | |||| | |||||||||| |||| Sbjct 344 TTGTCAGAGCTGGGTATAGGAGCGA 368 >seq1221344 Length=455 Score = 87.8 bits (96), Expect = 7e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct 1 TGGGACCCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCAGAGGAAACTCTGGTG 60 Query 627 G 627 | Sbjct 61 G 61 >seq2702958 Length=2695 Score = 82.4 bits (90), Expect = 3e-13 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 566 TTGGGACCCGAAAGATGGTGAACT-ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||||||||||||| ||||||||| ||||||| ||| ||||| |||||||| ||||| Sbjct 1102 TTGGGACCCGAAAGTTGGTGAACTTATGCCTGGCCAGGACGAAGC-AGAGGAAAATCTGG 1044 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATC 656 |||||| || | | |||| |||||||||| Sbjct 1043 TGGAGGTCCGAATCAAGTCTGACGTGCAAATC 1012 >seq1160617 Length=444 Score = 82.4 bits (90), Expect = 3e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 |||| |||| ||||||||||||||||| ||| || | | |||||| |||| |||| || Sbjct 242 TAGGACGAAGACAGAGGAAACTCTGGTGCAGGTCCGAACCAGTTCTGACGTGGAAATTGA 301 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 | |||| | ||||||||||||||| Sbjct 302 TTGTCAGAGCTGGGTATAGGGGCGA 326 >seq2320401 Length=1072 Score = 80.6 bits (88), Expect = 1e-12 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||||||||||||||||| ||| |||||||||||||||||||||||||| || | Sbjct 614 AGATGGTGAACTATGCCTAGCCAGGACGAAGCCAGAGGAAACTCTGGTGGAGGTCCGAAT 555 Query 638 CGGTTCTGGCGTGCAAATC 656 | |||||| |||| | ||| Sbjct 554 CAGTTCTGACGTGTATATC 536 >seq1537191 Length=528 Score = 80.6 bits (88), Expect = 1e-12 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 |||||||||||||||||||||||||| | | | |||||| | || |||||||| |||| Sbjct 333 GAAGCCAGAGGAAACTCTGGTGGAGGTCTGAACCAGTTCTGACATGTAAATCGATTGTCA 392 Query 665 AATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| Sbjct 393 GAGCTGGTTATAGGGGCGA 411 >seq1474923 Length=511 Score = 80.6 bits (88), Expect = 1e-12 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 |||||||||||||||||||||||||| | | | |||||| | || |||||||| |||| Sbjct 196 GAAGCCAGAGGAAACTCTGGTGGAGGTCTGAACCAGTTCTGACATGTAAATCGATTGTCA 137 Query 665 AATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| Sbjct 136 GAGCTGGTTATAGGGGCGA 118 >seq2294054 Length=1033 Score = 78.8 bits (86), Expect = 4e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGA-GGTAAATTTCTTCTAAAGCTAAA 98 |||| | |||| || | |||||||| || | | |||||| | | |||||||||||| Sbjct 514 GAGTAGGGTTGGTTAATACTGCAGCTCAAAGAGAGCTGGTAAACTCCATCTAAAGCTAAA 573 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | | ||| ||||||| |||| || |||| ||||| ||||| | |||||| | Sbjct 574 TACTCCCACGAGTCCGATAGGAGACAAATACCGTGAAGGAAAGTTGAAAGGGACTTTGAA 633 Query 159 AAGAGAGTTAAAAAGCACGTGAA 181 | ||||||| || || || |||| Sbjct 634 AGGAGAGTTCAAGAGTACTTGAA 656 >seq2351853 Length=1120 Score = 77.0 bits (84), Expect = 1e-11 Identities = 84/112 (75%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 76 GGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGAT 135 |||||||| |||||||||||||||| | ||| ||||||| ||||||| ||| Sbjct 884 GGTAAATTCCTTCTAAAGCTAAATACAACCACGAGTCCGATAGGAGACAAGTACCGTGGG 943 Query 136 CGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTT 187 ||||| ||| ||| ||| || | |||||| | || || ||||||| | ||| Sbjct 944 GGAAAGTTGAGAAGGACTATGAAGAGAGAGCTCAAGAGTACGTGAAGTCGTT 995 >seq833039 Length=394 Score = 77.0 bits (84), Expect = 1e-11 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 1 AAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCAGAGGAAACTCTGGTGGAGG 55 >seq1353999 Length=482 Score = 75.2 bits (82), Expect = 5e-11 Identities = 64/79 (81%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 |||| ||||||||||||||||| ||| || | | |||||| |||| |||| ||| || | Sbjct 313 GAAGTCAGAGGAAACTCTGGTGCAGGTCCGAACCAGTTCTGACGTGGAAATTGATTGTGA 372 Query 665 AATTTGGGTATAGGGGCGA 683 | ||||||||||||||| Sbjct 373 GAGCTGGGTATAGGGGCGA 391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2020997227600