Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq299228 282 1e-73 >seq299228 Length=330 Score = 282 bits (312), Expect = 1e-73 Identities = 208/238 (87%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 181 AAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA 240 |||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 330 AAGCTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCC-- 274 Query 241 CAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTC 300 | ||| |||||| ||| ||||| |||| |||||||||||||||||||||||||||| | Sbjct 273 CGAAG--GGCTCCGACTTTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-C 217 Query 301 CGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATT 360 |||||||||||||||||||||||||||||||| |||||||||||||| | | |||||| Sbjct 216 CGGGGTTCTTTTCGCCTTTCCCTCACGGTACTTGTTCACTATCGGTCGATTACGAGTATT 157 Query 361 TAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||||||||||||||||||||||| |||||||| || | |||| ||| |||||| Sbjct 156 TAGCCTTGGAGGATGGTCCCCCCATCTTCAGACAGGATTACACGTGTCCCGCCCTACT 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1207447159808