Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2726613 96.9 2e-18 seq2750283 91.5 9e-17 seq1497882 91.5 9e-17 seq1411520 87.8 1e-15 seq2510490 86.0 4e-15 seq2748964 84.2 1e-14 seq2532002 84.2 1e-14 seq2304282 82.4 4e-14 seq2219198 82.4 4e-14 seq2137472 80.6 2e-13 seq2343562 78.8 5e-13 seq1542394 77.0 2e-12 seq1097989 77.0 2e-12 seq1093534 77.0 2e-12 seq1085797 77.0 2e-12 seq376308 77.0 2e-12 seq2602953 75.2 7e-12 seq2744874 73.4 2e-11 seq2671129 73.4 2e-11 seq1841057 73.4 2e-11 seq1651592 73.4 2e-11 seq1613163 73.4 2e-11 seq1241468 73.4 2e-11 seq2463738 71.6 8e-11 seq2442730 71.6 8e-11 seq2432662 71.6 8e-11 seq2421247 71.6 8e-11 seq1758788 71.6 8e-11 seq1668756 71.6 8e-11 seq964720 71.6 8e-11 seq546694 71.6 8e-11 >seq2726613 Length=3328 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| |||||||||||||||||||||| Sbjct 3239 TCCGAAGGC-CTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGGGTGTACAAAG 3295 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| |||| ||||||||||| Sbjct 3296 GGCAGGGACTTAAT-CAACGCAAGCT 3320 >seq2750283 Length=8957 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 6944 TCCGAAGGC-CTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 7000 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| |||| ||||||||||| Sbjct 7001 GGCAGGGACTTAAT-CAACGCAAGCT 7025 >seq1497882 Length=517 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 127 CTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 70 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 69 TAAT-CAACGCAAGCT 55 >seq1411520 Length=495 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| ||||||| || Sbjct 116 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACACAG 172 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 173 GGCAGGGACGTAAT-CAACGCGAGCT 197 >seq2510490 Length=1447 Score = 86.0 bits (94), Expect = 4e-15 Identities = 66/76 (87%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || |||||| || ||||||||||| ||||||||||||||||||| Sbjct 1445 CTCACTAAATCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1388 Query 109 TAATACAACGCAAGCT 124 ||| |||| ||||||| Sbjct 1387 TAAAACAATGCAAGCT 1372 >seq2748964 Length=6651 Score = 84.2 bits (92), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 4/82 (5%) Strand=Plus/Plus Query 43 AAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCA 102 |||| ||||||||| ||| || ||||||||| | ||||||||| |||||||||||||| Sbjct 97 AAAGGTCTCACTAAATCAT--CAATCGGTAGTA-GAGACGGGCGGTGTGTACAAAGGGCA 153 Query 103 GGGACGTAATACAACGCAAGCT 124 ||||| | || ||||||||||| Sbjct 154 GGGACTTGAT-CAACGCAAGCT 174 >seq2532002 Length=1509 Score = 84.2 bits (92), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 3/82 (4%) Strand=Plus/Minus Query 41 CGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGG 100 || ||| ||||||||| ||||| || ||||| || |||||||| || |||||||||||| Sbjct 1166 CGGAAGGTCTCACTAAATCATTTAAT-CGGTATTA-GCGACGGGGGGTGTGTACAAAGGG 1109 Query 101 CAGGGACGTAATACAACGCAAG 122 ||||||| |||| ||||||||| Sbjct 1108 CAGGGACTTAAT-CAACGCAAG 1088 >seq2304282 Length=1048 Score = 82.4 bits (90), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||| ||||| | ||||||||||||||||||| Sbjct 184 CTCACTAAATCATT-CAATCGGTAGTA-GCGTCGGGCAGTGTGTACAAAGGGCAGGGACT 127 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 126 TAAT-CAACGCAAGCT 112 >seq2219198 Length=933 Score = 82.4 bits (90), Expect = 4e-14 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| ||| ||||||| ||||||||||| |||||||||| Sbjct 380 TCCGAAGGC-CTCACTAAATCATTCAATT-GGTAGTA-GCGACGGGCGGTGTGTACAAAG 324 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||| ||||||||||| Sbjct 323 GGCAGGGACTCAAT-CAACGCAAGCT 299 >seq2137472 Length=846 Score = 80.6 bits (88), Expect = 2e-13 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||||| ||||||| ||| ||||||||||||||||||| |||| |||||||| Sbjct 696 TTCAATCGGTAGTA-GCGACGGACGGCGTGTACAAAGGGCAGGGACTTAAT-CAACGCAA 753 Query 122 GCT 124 ||| Sbjct 754 GCT 756 >seq2343562 Length=1107 Score = 78.8 bits (86), Expect = 5e-13 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| || || ||||| |||| || |||||| || | ||||||||| |||||||||| Sbjct 412 TCCGAAGGT-CTGACTAAATCATT-CAATCGGTACTA-GAGACGGGCGGTGTGTACAAAG 356 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| |||| |||||||| || Sbjct 355 GGCAGGGACTTAAT-CAACGCAAACT 331 >seq1542394 Length=529 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 || ||||| |||| || ||||||||| |||||| |||| ||||||||||||||||||| Sbjct 205 CTTACTAAATCATT-CAATCGGTAGTA-GCGACGAGCGGTGTGTACAAAGGGCAGGGACT 262 Query 109 TAATACAACGCAAGCT 124 |||| || |||||||| Sbjct 263 TAAT-CAGCGCAAGCT 277 >seq1097989 Length=433 Score = 77.0 bits (84), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 4/85 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| || |||||| | |||| || |||| |||| |||| |||||| |||||||||| Sbjct 49 TCCGAAGGT-CTCACTCAATCATT-CAGTCGGCAGTA-GCGATGGGCGGTGTGTACAAAG 105 Query 99 GGCAGGGACGTAATACAACGCAAGC 123 ||||||||| |||| |||| ||||| Sbjct 106 GGCAGGGACTTAAT-CAACACAAGC 129 >seq1093534 Length=432 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || |||||| || |||||| |||| || |||||||||||||||| Sbjct 246 CTCACTAAATCATT-CAATCGGTACTA-GCGACGAGCGGTGTATACAAAGGGCAGGGACT 189 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 188 TAAT-CAACGCAAGCT 174 >seq1085797 Length=431 Score = 77.0 bits (84), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 4/88 (5%) Strand=Plus/Minus Query 37 ATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAA 96 |||||||| ||||| ||||| ||| || ||||||| | ||||| |||| |||||||| Sbjct 213 ATTCCGAA-GTTCTTACTAAATTATT-CAATCGGTAGGA-GCGACTAGCGGTGTGTACAA 157 Query 97 AGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||| | || ||||||||||| Sbjct 156 AGGGCAGGGACTTTAT-CAACGCAAGCT 130 >seq376308 Length=339 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || |||||| || |||||| |||| || |||||||||||||||| Sbjct 108 CTCACTAAATCATT-CAATCGGTACTA-GCGACGAGCGGTGTATACAAAGGGCAGGGACT 51 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 50 TAAT-CAACGCAAGCT 36 >seq2602953 Length=1786 Score = 75.2 bits (82), Expect = 7e-12 Identities = 79/96 (82%), Gaps = 6/96 (6%) Strand=Plus/Minus Query 31 AAGCC-AAT-TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGG 88 ||||| ||| |||||| | | |||| || |||| || ||||||||| |||||| ||||| Sbjct 349 AAGCCGAATGTCCGAAGGCT-TCACCAAATCATT-CAATCGGTAGTA-GCGACGAGCGGG 293 Query 89 GTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||| ||||||||||| || |||| ||||| ||||| Sbjct 292 GTGTCCAAAGGGCAGGAACTTAAT-CAACGGAAGCT 258 >seq2744874 Length=4934 Score = 73.4 bits (80), Expect = 2e-11 Identities = 77/95 (81%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 24 GTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGG 83 ||||| ||||| | ||||| || |||| ||| | || || ||||||||| ||||||| Sbjct 2283 GTCCAAGCAGCCAGT-CCGAAGGT-CTCATTAAATCCTT-CAATCGGTAGTA-GCGACGG 2228 Query 84 GCGGGGTGTACAAAGGGCAGGGACGTAATACAACG 118 | || ||||||||||||||||||| |||| ||||| Sbjct 2227 GTGGTGTGTACAAAGGGCAGGGACTTAAT-CAACG 2194 >seq2671129 Length=2260 Score = 73.4 bits (80), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| || |||||||| ||| || ||||||||| |||| |||||| ||||||| || Sbjct 292 TCCGAAGGT-CTCACTAAATCATG-CAGTCGGTAGTA-GCGATGGGCGGTGTGTACAGAG 236 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| |||| ||| |||| || Sbjct 235 GGCAGGGACTTAAT-CAAGGCAAACT 211 >seq1841057 Length=641 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||||| |||||||| |||| || ||||||||| ||||||||||| |||| ||||| Sbjct 96 TCCGAAAGC-CTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTGCAAAG 40 Query 99 GGCAGGGACGTAAT 112 ||||| ||| |||| Sbjct 39 GGCAGAGACATAAT 26 >seq1651592 Length=563 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || |||||| || |||||| |||| || |||||||||||||||| Sbjct 310 CTCACTAAATCATT-CAATCGGTACTA-GCGACGAGCGGTGTATACAAAGGGCAGGGACT 367 Query 109 TAATACAACGCAAGCT 124 |||| |||| |||||| Sbjct 368 TAAT-CAACACAAGCT 382 >seq1613163 Length=551 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||| ||| || |||||||| ||||||||||| ||||||| Sbjct 282 CTCACTAAATCATG-CAGTCGGTCGTA-GCAACGGGCGGTGTGTACAAAGGACAGGGACA 225 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 224 TAAT-CAACGCAAGCT 210 >seq1241468 Length=459 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||| ||||| ||| Sbjct 1 CTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAAGGCAGAGACA 58 Query 109 TAATACAACGCAAGCT 124 |||| || ||||||| Sbjct 59 TAAT-CATTGCAAGCT 73 >seq2463738 Length=1330 Score = 71.6 bits (78), Expect = 8e-11 Identities = 70/85 (82%), Gaps = 4/85 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| || |||||| | |||| || |||| |||| |||| |||| | |||||||||| Sbjct 882 TCCGAAGGT-CTCACTTAATCATT-CAGTCGGCAGTA-GCGATGGGCAGTGTGTACAAAG 938 Query 99 GGCAGGGACGTAATACAACGCAAGC 123 ||||||||| |||| |||| ||||| Sbjct 939 GGCAGGGACTTAAT-CAACACAAGC 962 >seq2442730 Length=1285 Score = 71.6 bits (78), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 3/73 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| || |||||||||||||||| Sbjct 158 CTCACTAAAACATT-CAGTCGGTAGTA-GCGACGGGCGGTGTATACAAAGGGCAGGGAC- 102 Query 109 TAATACAACGCAA 121 ||| ||||| || Sbjct 101 TAAATCAACGTAA 89 >seq2432662 Length=1264 Score = 71.6 bits (78), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| |||||||||||| ||||||||||| || ||||||| Sbjct 481 TCCGAAGGC-CTCACTAAATCATA-CATTCGGTAGTA-GCGACGGGCGGTGTCTACAAAG 537 Query 99 GGCAGGGACGTAATA 113 |||| |||| ||||| Sbjct 538 GGCATGGACTTAATA 552 >seq2421247 Length=1242 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| |||||| || ||||||||||| ||||||||||||||||||| ||| ||| |||| Sbjct 1235 TTCAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAA-GCAATGCAA 1178 Query 122 GCT 124 ||| Sbjct 1177 GCT 1175 >seq1758788 Length=604 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || |||||| || ||||||||||| ||||||||||||||||||| Sbjct 61 CTCACTAAATCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 4 Query 109 TAA 111 ||| Sbjct 3 TAA 1 >seq1668756 Length=569 Score = 71.6 bits (78), Expect = 8e-11 Identities = 75/92 (82%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 33 GCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGT 92 |||||| ||||| | |||||||| |||| || |||| | || ||||||||||| |||| Sbjct 254 GCCAAT-CCGAAGGC-CTCACTAAATCATT-CAATCGGCACTA-GCGACGGGCGGTGTGT 199 Query 93 ACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||| |||| ||| ||||||| ||| Sbjct 198 ACAAAGGGCATGGACTTAA-GCAACGCATGCT 168 >seq964720 Length=413 Score = 71.6 bits (78), Expect = 8e-11 Identities = 70/85 (82%), Gaps = 4/85 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| || ||||| || ||| || ||||||||| ||||||||||| ||||| ||| Sbjct 261 TCCGAAGGT-CTCACAAAATGATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTAATAAG 317 Query 99 GGCAGGGACGTAATACAACGCAAGC 123 || |||||| |||| |||||||||| Sbjct 318 GGTAGGGACTTAAT-CAACGCAAGC 341 >seq546694 Length=358 Score = 71.6 bits (78), Expect = 8e-11 Identities = 46/49 (94%), Gaps = 1/49 (2%) Strand=Plus/Plus Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||| ||||||||||||||||||| |||| ||||||||||| Sbjct 3 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAAT-CAACGCAAGCT 50 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 293042992160