Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1522324 138 1e-30 seq1153366 80.6 3e-13 >seq1522324 Length=523 Score = 138 bits (152), Expect = 1e-30 Identities = 140/179 (78%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGA 72 ||||||||||||||||||||| ||| | ||||| | || ||||| ||| |||||| Sbjct 345 TTTACTTTGAAAAAATTAGAGTGTTTCAGGCAGGTAATGGCCAGAATATCTTAGCATGGA 404 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 ||||| ||||||||| | ||||| ||||| | |||| | | | |||||||| | Sbjct 405 ATAATGGAATAGGACTTT-GGTTC-ATTTTATTGGTTATTGAATCAGA--GTAATGATTA 460 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 ||| ||| ||| ||||| | |||||| |||||||| |||||||||||||||||||||| Sbjct 461 ATAGGGACAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTGGATTTATT 519 >seq1153366 Length=443 Score = 80.6 bits (88), Expect = 3e-13 Identities = 92/120 (77%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TA 125 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | | | || Sbjct 427 CATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACACGAGGTA 370 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||||| || | ||| || |||||| | ||||| | | |||||||||||||||| Sbjct 369 ATGATTAAGAGGGACAGACGGGGGCATTCGTATTGCGACGCTAGAGGTGAAATTCTTGGA 310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498356468480