Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq2179407 143 8e-32 >seq2179407 Length=888 Score = 143 bits (158), Expect = 8e-32 Identities = 174/241 (72%), Gaps = 26/241 (11%) Strand=Plus/Minus Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 ||||||||||| ||||||||| |||||||||| |||| | |||||||| | || ||||| Sbjct 888 GGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGT 829 Query 344 CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA------------TAAT----------- 380 |||||| | ||||||| || | ||| || |||| Sbjct 828 CTTCGGATTGTAAAGCACTTTAAGTTGGGAGGAAGGGCAGTAAATTAATACTTTGCTGTT 769 Query 381 --GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438 |||| ||| || |||| |||||||||| |||||||||||||||||||||| Sbjct 768 TTGACGTTACCGACAGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAG 709 Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 |||| || ||||||| |||||||||| |||||||||| | |||||||||||| ||||| Sbjct 708 AGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCGCGTAGGTGGTTCGTTAAG 650 Query 499 T 499 | Sbjct 649 T 649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1456405337088