Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq42356 360 2e-94 seq8136 232 5e-56 >seq42356 Length=8389 Score = 360 bits (398), Expect = 2e-94 Identities = 935/1406 (67%), Gaps = 51/1406 (4%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || |||||||| || | || ||||| | ||| ||||| || || |||||||| || Sbjct 5799 TCCACTGTGAACTGAATGGGCTTGGCAGCAGGCTTTGTCCTCAGGTAATACATGCCTGTT 5740 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || || ||||| ||| |||| | |||||| || | | || |||| |||||| Sbjct 5739 TTCAGACCAGCCTTCCACCCATACAGATGCATGGAGCACATCTTCCCATAGGTCGGCTGT 5680 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 || | || || |||| ||||| ||||| || |||||| ||| || || |||||||| Sbjct 5679 GCAATGTGGATGTTCAGTGACTGGCTCTGGTCAATGTAAGCACCGCGGTCAGCAGCCATC 5620 Query 65258 TCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 | || | | | | || || || ||||| || || ||||||| || || | Sbjct 5619 TTCATCACA-GTCTTCTGTGACATTTCCCACACCGTTTTGTACAATGCCTTTAGGTCGTT 5561 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376 ||| ||| ||| || | || | || |||| | ||||| || | || | || Sbjct 5560 TGGGATCCCCTTGATCTGTTGAATGGAGCCACCATCAGCAATGATCTGGTTC----TTGA 5505 Query 65377 CT-CTGA---CCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 || | | ||||| ||| || | || | || | || ||| | || | ||| | Sbjct 5504 CTTCAGGGCTCCACAGACCTCGCTCAGTCAGGTCTTTCAGCAGGTGGTGGTTCACGACCT 5445 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 | ||||| |||||||| ||||| |||||||| | || || ||| || || | || | Sbjct 5444 GAAACTCACCGGACAGAACACGGCGGACATACACATTAGAAGTGTAGGCCTCGATAGACT 5385 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 || |||| || ||||| || || || ||||| || ||||| ||||| | | |||||| | Sbjct 5384 CATTGTTCCCAAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAGGAGCAATGAAT 5325 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612 | || | || | | | |||| || | || | | |||| | ||||| ||| | Sbjct 5324 TGCGTAGCCCATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATCCCACA--GGTCAGT 5267 Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672 | | || ||| ||||| || | || || | || | ||||| || || Sbjct 5266 TGGGGTCA--CACC--CCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGCCCT 5211 Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAA 65732 | || | || || || | || || ||||||| |||||||| ||| ||||| ||| Sbjct 5210 CGTAAGTCTCATATGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAGCAT 5151 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 | || || ||||| || || | ||| || |||| || || ||||| | || | Sbjct 5150 AGTACATTGTCTCAAATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTCAAATGG-A 5092 Query 65793 TACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || | ||||| | || | || |||||||||||||| ||||| || ||||||||||| Sbjct 5091 TAGCGCATCAAAATGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGATGT 5032 Query 65852 CGCAAATTGGA---ACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 | || || || |||| |||||||| || |||||||| |||| || || || Sbjct 5031 CTCATGTTAGATGCACGT---GCCTCAGGAACCGGGTAGTAGTTGACCTCAATGATTTTG 4975 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTA 65968 |||| |||||||| || ||||| || | ||| |||| | || |||||| || Sbjct 4974 TTCAGGTTGCGTGTGACTACATGAACAACACGCCGCAGCTTCTCAAAATCA-------TA 4922 Query 65969 GGACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027 || | ||| || || || |||||| || ||||||| ||||| || ||||| Sbjct 4921 GGTGGCATCAGG---GC--GA----ACAAACATGTTCAGGGCAACGGATGCCAGATTGCA 4871 Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087 ||||| || || || | || | | |||| ||||| || || ||||| || ||||| Sbjct 4870 CACAGCAATTTCATCTGCAGAGCTGTACTGAACAATCTCAGTACACAGGTTGCTGCACTT 4811 Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147 ||||| |||| |||||| || || |||||| ||||| ||||| ||||| | |||| | Sbjct 4810 AATGGTACCCACATTCTGCTGGTTGGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAA 4751 Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT---T 66204 ||||| || ||||| || |||| ||||| || | |||| || |||||| | Sbjct 4750 TGGAGTACCAGTCTCCACCTGGGCTTCAATAATACTGCGCCACAGCTGGCGTGCAGGAAT 4691 Query 66205 CACCGTAC-GTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 | | | ||||||||| | ||| || || | ||||||||| || || | Sbjct 4690 CTGCTTGTTGTACCGCCCCTCTTTT----TCATACTTCTCGTAGAGGGCCTCAAACTCCT 4635 Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 | ||||| ||||| ||| | ||||||||| | ||| ||||| || ||||| | || Sbjct 4634 CTCCCCAAACTTCCTCCAGCCCTGGACACTTCTTTGGGCACATGAGTGACCATTGGGAAT 4575 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 | || || |||||||| || |||||||| ||||| | || ||||| ||||| || | Sbjct 4574 CAGCCTCCACCCGACGCATGAAAAGATCAGGGATCCACAAAGCATAGAAAAGATCACGAG 4515 Query 66384 CTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 |||| || || | || ||| || ||||| | | ||||| |||| || ||| Sbjct 4514 CTCGCATTTCTTCCTTCCCTGTG-TTCTTGCGAAGGGAAAGGAAGCTGAAGACATCCGCA 4456 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAA 66468 ||||| || ||||||||||| ||||| Sbjct 4455 TGCCAAGGCTCCAGGTAGATTGCGAA 4430 Score = 86.0 bits (94), Expect = 5e-12 Identities = 280/427 (66%), Gaps = 6/427 (1%) Strand=Plus/Minus Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547 || |||||||| || || | || | ||||||||| |||||||| || || || || Sbjct 4012 CCTCCTTGGTCAACATATCTGGCAGTGTCGTTGAAGACCCGCAACATGGGAACAAGGCCA 3953 Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGT-ATATCGTGAACATT 66606 || ||| | ||||| || || | || | ||| ||| || | || || ||||| Sbjct 3952 TTGGATGTCCCATTAGTCCCTGCAATATATG-TCCCGGTGGCCCTGATGCAATGGACATT 3894 Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATAT 66666 | ||||| || || || | || |||||| |||||| | || ||| | || Sbjct 3893 GACTCCAATCCCTCCTGCTGACTGCGAGATAAGAGCACACTGCATCAGTGTTTCATAAAT 3834 Query 66667 GCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGG 66726 || |||| |||| | ||||| || ||| |||| || ||||| || || || Sbjct 3833 TCCTAGAATGCTGTCATCTCGCATGGTGAGAAGGAAGCAGGAGGAGAGTTGAGGCTTAGG 3774 Query 66727 TGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATT 66786 ||| | || |||||| ||||| | ||| || || || | | ||| | ||| Sbjct 3773 GGTGCCAGCATTGAAGAGAGTGGGGGAAGCATGGGTGAACCACTTCTCAGAGAGCAGATT 3714 Query 66787 GTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCA 66845 ||| |||||||| || ||| ||| | || || || || || | || |||| ||||||| Sbjct 3713 GTATGTCTCGATAACTGCAGCAACATCATCTCCGTGGATGCCAACTGACACA-CGCATCA 3655 Query 66846 GGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTG-ATATGCATTAAGTAGGAGCGTTCC 66904 | | || |||||| || ||| | | | ||| || | || | ||| ||||||||| Sbjct 3654 GCATGTGTTGAGGGCGCTCGGCAA-CTTTTCCACCTATCTTCAGGAGGTACGAGCGTTCC 3596 Query 66905 AGGGTCT 66911 ||||||| Sbjct 3595 AGGGTCT 3589 >seq8136 Length=40417 Score = 232 bits (256), Expect = 5e-56 Identities = 260/345 (75%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 || ||||| ||| ||||||||| | || || || | ||||||||| | || || Sbjct 19744 GAGCCCCTTCTGCGAGAGAATCCAGGCCGATTTGTGGTCTTCCCCATCAAATACCCCGAC 19685 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 |||||| ||||||||| ||||| || || ||||||||||| ||||||||||| ||| | Sbjct 19684 ATTTGGGCCATGTACAAGAAGGCAGAGGCGTCCTTCTGGACCGTGGAGGAGGTGGATCTC 19625 Query 61147 TCCAAAGACATGAATGACTGGGAGC-GTTTATCGAGCGGTGAACAACATTTCATTAAACA 61205 |||| |||| |||| |||||||| | | | ||| || || | || ||||| || Sbjct 19624 TCCAGAGACCTGAAGTACTGGGAGAAGCTGAACGA-CGACGAGCGCCACTTCATATCCCA 19566 Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTT 61265 || | || ||||| ||||| ||||| || |||||||| |||||| | | || | || Sbjct 19565 CGTCCTCGCCTTCTTCGCCGCCTCGGATGGGATCGTCAACGAGAATCTGGTCGAGAGGTT 19506 Query 61266 CGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGA 61325 || |||||||||||||||| | ||||| || || || ||||| |||||| | || ||||| Sbjct 19505 CGGGCAGGAGGTGCAAGTGACAGAGGCCCGCTGCTTTTACGGGTTCCAGGTCGCTATGGA 19446 Query 61326 GAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 ||| |||||||||||||||||||| | || || || || ||||| Sbjct 19445 GAACGTCCACTCGGAGATGTACAGCATGCTAATTGAGACTTACAT 19401 Score = 190 bits (210), Expect = 2e-43 Identities = 303/429 (71%), Gaps = 7/429 (2%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||| ||||| || || || || ||||| ||||| || |||||| | || | Sbjct 19318 TGTTCAATGCAATCGAAACCATGCCTTGCGTTAAGCGCAAAGCCGACTGGGCCCTGAAGT 19259 Query 61457 GGATCACCAGTACAACGG-CTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 |||| | | | | | | | || |||| ||||| | | || ||||| | ||| || Sbjct 19258 GGAT-AGCGGATGATCAGTCCACGTTTGCCGAACGTGTAATCGCTTTTGCTGCGGTGGAA 19200 Query 61516 GGTGTATTTTTCAGTGGATCGTTT-GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 || | || ||| || | |||| ||||| ||||| ||| ||||||| ||||| |||| Sbjct 19199 GGCATTTTCTTCTCCGG-TAGTTTCGCCGCCATCTTCTGGCTGAAGAAGCGTGGCGTTAT 19141 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTT 61634 ||| || || ||||||||||| |||||||| || |||||||||||| | || || || || Sbjct 19140 GCCTGGACTTACCTTCAGCAACGAGTTGATCTCGCGCGACGAGGGCCTCCACTGCGACTT 19081 Query 61635 TGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGA 61694 ||| | | ||||||| ||||||| || |||||| | ||| | || || Sbjct 19080 TGCCTGCCTCATGTTCAAAC---ATCTGGTCAACAAACCGTCGAAAGAGAGAGTCACTGC 19024 Query 61695 GATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTC 61754 |||| || || || || || ||||| ||||||||||||||| | || | ||||| Sbjct 19023 GATTATTGCCGATGCCGTGACAATCGAGCAGGAATTTCTGACTAAGGCACTACCCGTGGA 18964 Query 61755 ACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCT 61814 | || || ||||| || || ||| |||||| ||||| ||||| ||||| | || Sbjct 18963 CATGATTGGAATGAACTGCCAGCTCATGAAGCAGTACATTGAGTTTGTGGCCGATAGGCT 18904 Query 61815 GTTGGTCGA 61823 |||||||| Sbjct 18903 TTTGGTCGA 18895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397248443662640