Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq296 140 1e-30 seq3797 131 7e-28 seq2135 104 1e-19 seq3270 82.4 3e-13 seq134 77.0 1e-11 >seq296 Length=598851 Score = 140 bits (154), Expect = 1e-30 Identities = 109/130 (84%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||| ||||| ||||||||||||| |||||||||||| ||| || |||||| Sbjct 304084 AGAGCATACACGTTGGAACCCGAAAGATGGAGAACTATGCCTGGGCAGGACGAGGCCAGA 304025 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||| ||||||| ||||| ||||||||||||| |||| | | ||| Sbjct 304024 GGAAACTCTGGTGGAGGTCCGCAGCGATTCTGACGTGCAAATCGATTGTCAGACCTTGGT 303965 Query 674 ATAGGGGCGA 683 ||||||| || Sbjct 303964 ATAGGGGTGA 303955 >seq3797 Length=39527 Score = 131 bits (144), Expect = 7e-28 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||| ||||||||| |||||||||||||||||| || ||| ||| |||||| Sbjct 7964 AGAGCATACACATTGGGACCCAAAAGATGGTGAACTATGCTTGGGCAGGATGAGGCCAGA 8023 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||| ||||| ||||| |||||||||||||| ||| | | ||| Sbjct 8024 GGAAACTCTGGTGGAGGTCTACAGCGATTCTGACGTGCAAATCGATCATCAGACCTTGGT 8083 Query 674 ATAGGGGCGA 683 ||||| |||| Sbjct 8084 ATAGGAGCGA 8093 Score = 96.9 bits (106), Expect = 1e-17 Identities = 98/128 (77%), Gaps = 6/128 (5%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||| | ||||||||||||||| || || ||| ||||| Sbjct 7654 AGAGCGTACATGTTGGGATCTGAAAGATGGTGAACTGGGCAGGACAAGG------CCAGA 7601 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||| | |||| ||||| | |||||||| ||| ||| | | ||| Sbjct 7600 GGAAACTCTGGTGGAGGTCCACAGCAATTCTGACATGCAAATCAATCATCAGACCTTGGT 7541 Query 674 ATAGGGGC 681 |||||||| Sbjct 7540 ATAGGGGC 7533 >seq2135 Length=196046 Score = 104 bits (114), Expect = 1e-19 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||||||||||| |||||| |||| || |||||| | | ||| |||||| Sbjct 66772 GAGTCGGGTTGTTTGGGAGTGCAGCCCTAAGCAGGTGGTAAACTCCACTTAAGACTAAAT 66831 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | | |||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 66832 ACGGCCGTGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 66891 Query 160 AGAGAGTTAAAAAGCAC 176 |||||||| || || || Sbjct 66892 AGAGAGTTCAAGAGTAC 66908 >seq3270 Length=32712 Score = 82.4 bits (90), Expect = 3e-13 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 |||||||||||||||||||||| ||||||||||| | || ||||||||||||||| Sbjct 18018 CTGTTGGGACCCGAAAGATGGTAAACTATGCCTGGGCAAAACGAGGCCAGAGGAAACTCT 18077 Query 623 GGTGGAGG 630 |||||||| Sbjct 18078 GGTGGAGG 18085 >seq134 Length=958005 Score = 77.0 bits (84), Expect = 1e-11 Identities = 96/129 (74%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT-ATGCCTGAATAGGGTGAAGCCAG 612 |||||||| | |||||||| ||||||||||||||| |||||| ||| || | |||| Sbjct 636206 AGAGCATACATATTGGGACCAGAAAGATGGTGAACTAATGCCTATATA-GGACAGTCCAG 636264 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 |||||| |||| ||||| || | ||||| | | ||||| ||| |||| | | || Sbjct 636265 AGGAAATTCTGATGGAGATCATCAACAATTCTGACATAAAAATCAATCATCAAGTCTTGG 636324 Query 673 TATAGGGGC 681 ||| || || Sbjct 636325 TATGGGTGC 636333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079775697350