Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq7933 223 1e-55 seq20 75.2 3e-11 >seq7933 Length=11002 Score = 223 bits (246), Expect = 1e-55 Identities = 261/358 (73%), Gaps = 26/358 (7%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| ||||||||| ||||| ||| ||||||| ||| ||| |||| | ||||| | Sbjct 4222 ATTAGGTAGTTGGTAGGGTAAAGGCCTACCAAGCCGATGATGTATAGCGGGGTTGAGAAG 4281 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| |||||| | | | ||||| |||| | | ||| |||||| ||||||||| ||| Sbjct 4282 CTGATCCGCCACACTAGGATTGAGATACGGCCTAGACTTCTACGGAAGGCAGCAGCAGGG 4341 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 ||| || ||||||| || ||||| ||||| ||| || | ||||| |||||||| ||| Sbjct 4342 AATTTTCCACAATGAGCGAAAGCTTGATGGAGCGACACAGCGTGCAGGATGAAGGTCTTA 4401 Query 348 GGGTCGTAAAGCTCTGTCCTCAAGGAAGATAA-------------------------TGA 382 || | ||||| |||| | | |||||| | ||| Sbjct 4402 GGATTGTAAACTGCTGTTGTGAGGGAAGAACAGCCGGGGGAGGAAATGCCTCCGGTTTGA 4461 Query 383 CGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGG 442 |||||| | | || |||| ||||| ||||| |||||||||| ||||||||||| ||||| Sbjct 4462 CGGTACCTCACCAGAAAGCACCGGCAAACTATGTGCCAGCAGTCGCGGTAATACATAGGG 4521 Query 443 GGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 || ||||||||||||| ||| | |||||||||| || |||||||||| | ||||||| Sbjct 4522 TGCAAGCGTTATCCGGATTTA-TTGGGCGTAAAGCGTTCGTAGGTGGTATGTTAAGTC 4578 >seq20 Length=1375932 Score = 75.2 bits (82), Expect = 3e-11 Identities = 60/72 (83%), Gaps = 3/72 (4%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 ||||||||||||||| |||| ||||||||||||| | |||| |||| || ||||||| Sbjct 575347 GATTAGCTAGTTGGT---GTAATGGCTTACCAAGGCAATGATCTATAGCTGATCTGAGAG 575291 Query 227 GGTGATCGGCCA 238 | ||||| |||| Sbjct 575290 GATGATCAGCCA 575279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497443395968