Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2307 226 9e-57 seq679 165 2e-38 seq35 154 4e-35 seq2380 143 8e-32 seq870 131 5e-28 seq229 100 9e-19 seq812 82.4 2e-13 seq2839 77.0 1e-11 >seq2307 Length=186316 Score = 226 bits (250), Expect = 9e-57 Identities = 203/253 (80%), Gaps = 5/253 (2%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 || |||||||||| | | || ||| |||| || ||| ||||| | |||||||||| Sbjct 124457 ACCCATTCCAATTGCGGGGCCTCAATAGAGTCCCATATTGTTATTTTTCATCACTACCTC 124398 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 124397 CCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATTT 124338 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||| ||| |||||||||||||||| |||| ||||| Sbjct 124337 CTCAGGCTCCCTCTCCGGAATCGAATCCTGATTCCCCGTTACCCGTAACGACCACGGTAG 124278 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 | || ||||| ||||||||||||| | | | ||||| || | |||| || | Sbjct 124277 GTGCATAACCTACTGTCGAAAGTTGATA----ATACACTTGAAAGATACGTCGCTGGTGC 124222 Query 242 AAGGCCATGCGAT 254 || || |||||| Sbjct 124221 TAGACCGTGCGAT 124209 >seq679 Length=297080 Score = 165 bits (182), Expect = 2e-38 Identities = 111/124 (90%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 44 ATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCT 103 |||| | |||||||||||||||| | ||| ||||||||||||||||||||||||||||| Sbjct 204521 ATTTTTCTTCACTACCTCCCCGTGACTGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCT 204580 Query 104 TGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTAC 163 ||||||| |||||| ||||||||||| | |||||||||||||||||| ||||| ||||| Sbjct 204581 TGGATGTAGTAGCCATTTCTCAGGCTTCTTCTCCGGAATCGAACCCTGATTCCTTGTTAC 204640 Query 164 CCGT 167 |||| Sbjct 204641 CCGT 204644 >seq35 Length=1082662 Score = 154 bits (170), Expect = 4e-35 Identities = 108/123 (88%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 79 TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCG 138 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361917 TAATTTATGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCG 361858 Query 139 GAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATC 198 |||||||||||| | |||||||||||||| |||||||||||| || |||| |||| Sbjct 361857 GAATCGAACCCTGAATCCCCGTTACCCGTAACGACCATGGTAGGCACATAACCTATCATC 361798 Query 199 GAA 201 || Sbjct 361797 AAA 361795 >seq2380 Length=110814 Score = 143 bits (158), Expect = 8e-32 Identities = 117/141 (83%), Gaps = 6/141 (4%) Strand=Plus/Plus Query 6 CATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||||||||| | || || |||| || || | ||||| | |||||||||||| Sbjct 56414 CATTCCAATTACTGGGCCTCAGTAGAGTCCCGTGTTGTTATTTTTCATCACTACCTCCCT 56473 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 | ||| ||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 56474 G-----GGAGTGGGTAATTTGTGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 56528 Query 125 AGGCTCCCTCTCCGGAATCGA 145 ||||||||||||||||||||| Sbjct 56529 AGGCTCCCTCTCCGGAATCGA 56549 >seq870 Length=315054 Score = 131 bits (144), Expect = 5e-28 Identities = 101/118 (86%), Gaps = 3/118 (3%) Strand=Plus/Minus Query 388 GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT 447 |||| || || ||| |||||||||||||||||||||||| |||||||| ||| | Sbjct 103907 GTACAGTCTAAGGAACCGTAACTGATTTAATGAGCCATTCGCGGTTTCACTTTATT--TC 103850 Query 448 GCT-TATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | | | ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 103849 GGTATGTACTTAGACATGCATGGCTTAATTTTTGAGACAAGCATATGACTACTGGCAG 103792 >seq229 Length=564688 Score = 100 bits (110), Expect = 9e-19 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAA-AGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||| ||||||||||| ||| ||| |||| ||||||| ||||| ||||||||||| Sbjct 435962 GTACCCATTCCAATTATGCCACCTAAATAGAGTCCTGTATTGTTATTTTTTGTCACTACC 435903 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT 99 |||||||| | ||| ||||||||||| | ||||||||||| Sbjct 435902 TCCCCGTGCCAGGAGTGGGTAATTTGTGTGCCTGCTGCCT 435863 >seq812 Length=426997 Score = 82.4 bits (90), Expect = 2e-13 Identities = 52/55 (95%), Gaps = 1/55 (2%) Strand=Plus/Plus Query 51 GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 105 ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct 178721 GTCACTACCTCCCCGTGCCGGGAGTGGGTAATTTG-GCGCCTGCTGCCTTCCTTG 178774 >seq2839 Length=106195 Score = 77.0 bits (84), Expect = 1e-11 Identities = 100/139 (72%), Gaps = 7/139 (5%) Strand=Plus/Minus Query 45 TTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 104 ||| || |||||| ||| || | ||| |||||||||||| | ||||| |||| | | Sbjct 100938 TTTTTTCCCACTACTATCCCATGACAGGAGTGGGTAATTTGCATGGCTGCTACCTTTCCT 100879 Query 105 GGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACC 164 |||||||||||| |||| ||| ||||| |||| ||| | ||| ||| ||||| Sbjct 100878 GGATGTGGTAGC-------CAGGTTCCTTCTCCAGAATTGAATTATGATTTCCCATTACC 100826 Query 165 CGTTGATACCATGGTAGGC 183 | | | |||| |||| || Sbjct 100825 CATAAAGACCAAGGTAAGC 100807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510242057472