Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq920 196 9e-48 seq1322 190 4e-46 >seq920 Length=66673 Score = 196 bits (216), Expect = 9e-48 Identities = 250/337 (74%), Gaps = 12/337 (4%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||||| ||||| ||||||||| ||||| || || ||||| ||||||||| Sbjct 6864 TACCCCGAG-AGGGGAGTGAAATAGTTTCTGAAACCATATGCTTACAACAAGTCGGAGCC 6922 Query 61 GAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCG-TCACCAG 119 || | | ||||||||||||||||||| | |||||||| ||||||| || | || | Sbjct 6923 C-GTTAATGGGTGACGGCGTGCCTTTTGTAGAATGAGCCGGCGAGTTA--CGATTACATG 6979 Query 120 CGAGGTTAAGGGCTTCAG--GCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC 177 | |||||||| || | | | | ||||||||||||||||||||| || |||||| Sbjct 6980 CAAGGTTAAG---TTGAAAAGACGG--AGCCGAAGTGAAAGCGAGCCTGAATAGGGCGTT 7034 Query 178 GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGG 237 ||| |||| ||||| ||||||| |||||||| ||| |||||||||||||| | Sbjct 7035 TAGTATGTGGTCGTAGACCCGAAACCAGGTGATCTAGCCATGAGCAGGTTGAAGTTAATG 7094 Query 238 TAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGT 297 |||| | ||||||||||||||| |||||||||| |||||||| | || | Sbjct 7095 TAACAGTTAATGGAGGACCGAACCAACGTTCGTTGAAAAGACCGTGGATGACTTGTGGCT 7154 Query 298 AGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 || ||||||| |||||| ||| ||| |||||| || Sbjct 7155 AGCGGTGAAATTCCAATCGAACCTGGAGATAGCTGGT 7191 >seq1322 Length=110664 Score = 190 bits (210), Expect = 4e-46 Identities = 249/337 (74%), Gaps = 12/337 (4%) Strand=Plus/Minus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||||| ||||| ||||||||| ||||| || || ||||| ||||||||| Sbjct 21960 TACCCCGAG-AGGGGAGTGAAATAGTTTCTGAAACCATATGCTTACAACAAGTCGGAGCC 21902 Query 61 GAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCG-TCACCAG 119 || | | ||||||||||||||||||| | |||||||| ||||||| || | || | Sbjct 21901 C-GTTAATGGGTGACGGCGTGCCTTTTGTAGAATGAGCCGGCGAGTTA--CGATTACATG 21845 Query 120 CGAGGTTAAGGGCTTCAG--GCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC 177 | |||||||| || | | | | |||| |||||||||||||||| || |||||| Sbjct 21844 CAAGGTTAAG---TTGAAAAGACGG--AGCCTAAGTGAAAGCGAGCCTGAATAGGGCGTT 21790 Query 178 GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGG 237 ||| |||| ||||| ||||||| |||||||| ||| |||||||||||||| | Sbjct 21789 TAGTATGTGGTCGTAGACCCGAAACCAGGTGATCTAGCCATGAGCAGGTTGAAGTTAATG 21730 Query 238 TAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGT 297 |||| | ||||||||||||||| |||||||||| |||||||| | || | Sbjct 21729 TAACAGTTAATGGAGGACCGAACCAACGTTCGTTGAAAAGACCGTGGATGACTTGTGGCT 21670 Query 298 AGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 || ||||||| |||||| ||| ||| |||||| || Sbjct 21669 AGCGGTGAAATTCCAATCGAACCTGGAGATAGCTGGT 21633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972780777472