Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq737 205 1e-50 seq378 205 1e-50 seq561 190 3e-46 seq488 131 3e-28 seq476 89.7 8e-16 >seq737 Length=19741 Score = 205 bits (226), Expect = 1e-50 Identities = 206/258 (80%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 6241 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 6298 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | | || |||||||| | ||||| | ||||| | | |||| | || Sbjct 6299 CTCCTTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 6358 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || |||| || ||| | | ||||| ||||||||||||| Sbjct 6359 ACCCGGGCCTTTCGGCCAGGGA---AGACACGCTGATTCCTTCAGTATAGCGCGCGTGCG 6415 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||| ||||| ||||| || |||| | ||| | Sbjct 6416 GCCCAGAACATCTAAGGGCATCACAGACCTGCTATTG-CTCAATCT--CGTGCGGCTAGA 6472 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 6473 AGCCGCCTGTCCCTCTAA 6490 Score = 95.1 bits (104), Expect = 2e-17 Identities = 73/84 (87%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||| ||| Sbjct 7088 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCACGCTTACTGGGAA-TTC 7145 Query 61 CTCGTTGAAGACCAACAATTGCAA 84 |||||| | | || |||||||| Sbjct 7146 CTCGTTCATGGGGAATAATTGCAA 7169 >seq378 Length=24228 Score = 205 bits (226), Expect = 1e-50 Identities = 206/258 (80%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||| | Sbjct 4985 GTACAAAGGGCAGGGACGTTATCAACGCGAGCTT-ATCACTCGCGCTTACTGGGAATT-C 4928 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 || ||| | | || |||||||| | ||||| | ||||| | | |||| | || Sbjct 4927 CTGGTTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 4868 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || |||| || ||| | | ||||||||||||||||||| Sbjct 4867 ACCCGGGCCTTTCGGCCAGGGA---AGACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 4811 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 4810 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 4754 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 4753 AGCCGCCTGTCCCTCTAA 4736 >seq561 Length=33869 Score = 190 bits (210), Expect = 3e-46 Identities = 168/205 (82%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 18240 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 18297 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || |||||||| | ||||| | ||||| | | |||| | || Sbjct 18298 CTCGTTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 18357 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || |||| || ||| | | ||||||||||||||||||| Sbjct 18358 ACCCGGGCCTTTCGGCCAGGGA---AGACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 18414 Query 180 GCCCAGAACATCTAAGGGCATCACA 204 ||||||||||||||||||||||||| Sbjct 18415 GCCCAGAACATCTAAGGGCATCACA 18439 Score = 114 bits (126), Expect = 2e-23 Identities = 96/113 (85%), Gaps = 5/113 (4%) Strand=Plus/Plus Query 145 AGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA 204 |||| || ||| | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 18454 AGACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA 18513 Query 205 GACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAAAGGC-CATCTCCCTCGAA 255 |||||||||||| ||||| || |||| | ||| ||| | | | |||||| || Sbjct 18514 GACCTGTTATTG-CTCAATCT--CGTGCGGCTAGAAGCCGCCTGTCCCTCTAA 18563 >seq488 Length=40361 Score = 131 bits (144), Expect = 3e-28 Identities = 144/185 (78%), Gaps = 9/185 (5%) Strand=Plus/Minus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTC 132 || |||||||| | |||| | ||||| | | |||| | |||||||| ||| || Sbjct 34770 AATAATTGCAAGCCCCAATCCATAGCACGAAGGAGGTTCAGCGGGTTACCCGGGCCTTTC 34711 Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 ||||| || |||| || ||| | | |||||||||||||||||||||||||||||||| Sbjct 34710 GGCCAGGGA---AGACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 34654 Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAAAGGC-CATCTCCC 250 |||||||||||||||||||||||| ||||| || |||| | ||| ||| | | | |||| Sbjct 34653 AAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGAAGCCGCCTGTCCC 34597 Query 251 TCGAA 255 || || Sbjct 34596 TCTAA 34592 >seq476 Length=7004 Score = 89.7 bits (98), Expect = 8e-16 Identities = 84/103 (82%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||| |||| ||||||||||||| |||||||||||||||| |||| ||| Sbjct 101 GTACAAAGGGCAGGG-CGTAATCAACGCGAGCTT-ATGACTCGCGCTTACT-GGAAATTC 45 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 ||| || | | || |||||||| | ||||| | ||||| Sbjct 44 CTCATTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751985604840