Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq737 179 7e-43 seq378 158 2e-36 >seq737 Length=19741 Score = 179 bits (198), Expect = 7e-43 Identities = 211/279 (76%), Gaps = 10/279 (4%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| || | |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 7455 TGCTCTTTACCGAGTGTCGAGGTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 7396 Query 100 AAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| ||| || |||||| |||||||||||| ||||||||| | |||| Sbjct 7395 AAAGCAGGCTACCTTCGCCTGAATACTGCGTGCATGGAATAATGGAATAGGACCT-CGGT 7337 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| | Sbjct 7336 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 7278 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| || ||||||| Sbjct 7277 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAAAG 7218 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 | || |||| |||||||||||||||| ||||||||| Sbjct 7217 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAG 7180 >seq378 Length=24228 Score = 158 bits (174), Expect = 2e-36 Identities = 184/240 (77%), Gaps = 10/240 (4%) Strand=Plus/Plus Query 86 AAATTAGAGTGTTCAAAGCAGGC--CTTTGCTC-GAATACATTA-GCATGGAATAATAGA 141 ||||||||||| | ||||||||| |||| | |||||| |||||||||||| || Sbjct 3831 AAATTAGAGTGCTTAAAGCAGGCTACTTTCACCTGAATACTGCGTGCATGGAATAATGGA 3890 Query 142 ATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGG 198 ||||||| | |||||||||||||||||||| | ||| | ||| ||||||||||||||| Sbjct 3891 ATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGG 3948 Query 199 ATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACT 258 | || ||||| | ||||| || ||||||||||||||||||| ||||| Sbjct 3949 ACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACG 4008 Query 259 AACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || |||||||| || |||| |||||||||||||||| ||||||||||||| || Sbjct 4009 GACAGAAGCGAAAGCATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 4067 Score = 77.0 bits (84), Expect = 6e-12 Identities = 86/113 (76%), Gaps = 4/113 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| || | |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 3716 TGCTCTTTACCGAGTGTCGAGGTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 3775 Query 100 AAAGCAGG---CCTTTGCTCGAATAC-ATTAGCATGGAATAATAGAATAGGAC 148 |||||||| |||| || |||||| |||||||||||| ||||||||| Sbjct 3776 AAAGCAGGCTACCTTCGCCTGAATACTGCGTGCATGGAATAATGGAATAGGAC 3828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915181915648