Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1322 86.0 6e-15 seq920 86.0 6e-15 >seq1322 Length=110664 Score = 86.0 bits (94), Expect = 6e-15 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| || | | || ||| |||||||| ||| | |||||| ||||| |||| Sbjct 22474 GGTGGATGCCTTGGAATTGGAAGACGATGAAGGACGCGATTACCTGCGATAAGCTTCGGG 22415 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATT 122 || | | ||| | |||||||| |||| ||||||||||| ||||| ||| || Sbjct 22414 GAGCTGGAAATAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCACTATCTT 22360 >seq920 Length=66673 Score = 86.0 bits (94), Expect = 6e-15 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| || | | || ||| |||||||| ||| | |||||| ||||| |||| Sbjct 6350 GGTGGATGCCTTGGAATTGGAAGACGATGAAGGACGCGATTACCTGCGATAAGCTTCGGG 6409 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATT 122 || | | ||| | |||||||| |||| ||||||||||| ||||| ||| || Sbjct 6410 GAGCTGGAAATAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCACTATCTT 6464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476790872856