Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq1322 288 3e-75 seq920 282 1e-73 >seq1322 Length=110664 Score = 288 bits (318), Expect = 3e-75 Identities = 266/336 (79%), Gaps = 1/336 (0%) Strand=Plus/Minus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 |||||| | | |||| |||||||||| |||||||||||||||||||||| |||| | Sbjct 23986 ATACCTTACCAGAAAGCCACGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGTGG 23927 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTG 121 ||||||||| |||| ||| ||||||||||||||||| || ||||| || ||| | | | Sbjct 23926 CAAGCGTTATCCGGATTTATTGGGCGTAAAGCGTGCGTAGACGGTTTTGCAAGTCTGAGG 23867 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 | |||| ||||| |||| | || || || | ||| || |||||||| | || Sbjct 23866 TTAAATTTAGGGGCTCAACC-GCTAACCGCCTTGGAAACTACATTACTAGAGTATAGGAG 23808 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 ||| |||||||| || ||||||| ||| ||||||||||||| || |||||||||| || Sbjct 23807 AGGTTAGTGGAATTTCATGTGTAGCGGTGGAATGCGTAGATATATGAAGGAACACCAGTG 23748 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||| || |||| || ||||||| | |||||||||||||||||||||| | Sbjct 23747 GCGAAGGCGGCTAACTGGCCTATTACTGACGTTGTGGCACGAAAGCGTGGGGAGCAAATA 23688 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||| |||||||||||| |||||||| Sbjct 23687 GGATTAGATACCCTAGTAGTCCACGCCGTAAACGAT 23652 >seq920 Length=66673 Score = 282 bits (312), Expect = 1e-73 Identities = 265/336 (79%), Gaps = 1/336 (0%) Strand=Plus/Plus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 |||||| | | |||| |||||||||| |||||||||||||||||||||| |||| | Sbjct 5091 ATACCTTACCAGAAAGCCACGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGTGG 5150 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTG 121 ||||||||| |||| ||| ||||||||||||||||| || ||||| || ||| | | | Sbjct 5151 CAAGCGTTATCCGGATTTATTGGGCGTAAAGCGTGCGTAGACGGTTTTGCAAGTCTGAGG 5210 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 | |||| ||||| |||| | || || || | ||| || |||||||| | || Sbjct 5211 TTAAATTTAGGGGCTCAACC-GCTAACCGCCTTGGAAACTACATTACTAGAGTATAGGAG 5269 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 ||| |||||||| || ||||||| ||| ||||||||||||| || |||||||||| || Sbjct 5270 AGGTTAGTGGAATTTCATGTGTAGCGGTGGAATGCGTAGATATATGAAGGAACACCAGTG 5329 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||| || |||| || ||||||| | ||||||||||||||| |||||| | Sbjct 5330 GCGAAGGCGGCTAACTGGCCTATTACTGACGTTGTGGCACGAAAGCGTGGGCAGCAAATA 5389 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||| |||||||||||| |||||||| Sbjct 5390 GGATTAGATACCCTAGTAGTCCACGCCGTAAACGAT 5425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289574517504