Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1322 107 3e-21 seq920 107 3e-21 >seq1322 Length=110664 Score = 107 bits (118), Expect = 3e-21 Identities = 173/248 (70%), Gaps = 23/248 (9%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||| |||||||||||| || ||||||||| |||| || ||| ||| Sbjct 20602 TTAACCTTCCAGCACTGGGCAGGCGTCACCCCCTATACATCGTCTTA-CGACTTAGCAGA 20660 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 || |||||||||| ||||||||||| || ||| |||||| |||| Sbjct 20661 GAGCTGTGTTTTTGCTAAACAGTCGCCCGGACCTCTTCACTGCGA----------CTCA- 20709 Query 122 CACGTCGTTCACCAGCAGTG-GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | | || || || ||||||||| | || |||||||| ||||||| || Sbjct 20710 ----TATT------GCTATGAGCTCCCCTTCTCGCTAACTTACGGGGTTATTTTGCAGAG 20759 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| | | |||| | || ||||||| || ||| | ||||||| |||||| || Sbjct 20760 TTCCTTAGCTATAGTTATCTCGCTTGCCTTAGGATATTCTCCTTGACCACGTGTGTCCGT 20819 Query 241 TTACGGTA 248 | ||||| Sbjct 20820 TCTCGGTA 20827 >seq920 Length=66673 Score = 107 bits (118), Expect = 3e-21 Identities = 173/248 (70%), Gaps = 23/248 (9%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||| |||||||||||| || ||||||||| |||| || ||| ||| Sbjct 8222 TTAACCTTCCAGCACTGGGCAGGCGTCACCCCCTATACATCGTCTTA-CGACTTAGCAGA 8164 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 || |||||||||| ||||||||||| || ||| |||||| |||| Sbjct 8163 GAGCTGTGTTTTTGCTAAACAGTCGCCCGGACCTCTTCACTGCGA----------CTCA- 8115 Query 122 CACGTCGTTCACCAGCAGTG-GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | | || || || ||||||||| | || |||||||| ||||||| || Sbjct 8114 ----TATT------GCTATGAGCTCCCCTTCTCGCTAACTTACGGGGTTATTTTGCAGAG 8065 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| | | |||| | || ||||||| || ||| | ||||||| |||||| || Sbjct 8064 TTCCTTAGCTATAGTTATCTCGCTTGCCTTAGGATATTCTCCTTGACCACGTGTGTCCGT 8005 Query 241 TTACGGTA 248 | ||||| Sbjct 8004 TCTCGGTA 7997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694386707448