Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1322 86.0 7e-15 seq920 86.0 7e-15 >seq1322 Length=110664 Score = 86.0 bits (94), Expect = 7e-15 Identities = 123/171 (72%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 26 AACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGA 85 ||||||||||||| ||| | |||||| ||||||| ||| || | | |||||| Sbjct 20820 AACGGACACACGTGGTCAAGGAGAATATCCTAAGGCAAGCGAGATAACTATAGCTAAGGA 20761 Query 86 ACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGC 145 ||| ||||| | |||| |||| || | || || ||| | | || ||| ||| | Sbjct 20760 ACTCTGCAAAATAACCCCGTAAGTTAGCGAGAAGGGGAGCTCAT--AGCAATATGAGT-C 20704 Query 146 GCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 |||| ||| |||||| ||| |||||||| ||||||||||| || ||| || Sbjct 20703 GCAGTGAAGAGGTCCGGGCGACTGTTTAGCAAAAACACAGCTCTCTGCTAA 20653 >seq920 Length=66673 Score = 86.0 bits (94), Expect = 7e-15 Identities = 123/171 (72%), Gaps = 3/171 (2%) Strand=Plus/Plus Query 26 AACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGA 85 ||||||||||||| ||| | |||||| ||||||| ||| || | | |||||| Sbjct 8004 AACGGACACACGTGGTCAAGGAGAATATCCTAAGGCAAGCGAGATAACTATAGCTAAGGA 8063 Query 86 ACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGC 145 ||| ||||| | |||| |||| || | || || ||| | | || ||| || | | Sbjct 8064 ACTCTGCAAAATAACCCCGTAAGTTAGCGAGAAGGGGAGC--TCATAGCAATATGA-GTC 8120 Query 146 GCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 |||| ||| |||||| ||| |||||||| ||||||||||| || ||| || Sbjct 8121 GCAGTGAAGAGGTCCGGGCGACTGTTTAGCAAAAACACAGCTCTCTGCTAA 8171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531189831504