Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1322 262 1e-67 seq920 262 1e-67 >seq1322 Length=110664 Score = 262 bits (290), Expect = 1e-67 Identities = 230/281 (82%), Gaps = 4/281 (1%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||||||||||||| | | ||||||| |||||| | |||||||| Sbjct 20408 CGCGGGTAACCTGCATCTTCACAGGTACTAAGATTTCACCGAGTCTATAGCCGAGACAGC 20467 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||| Sbjct 20468 GTCCGGATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCTGACAAGGAATTTCGCTACC 20527 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC-GATCAAGAGCTTCGCGTT 179 ||||||||||||| ||||||||||||||| || |||||||| | |||| |||||||| | Sbjct 20528 TTAGGACCGTTATAGTTACGGCCGCCGTTCACTGGGGCTTCAGTTCAA-AGCTTCGCTTA 20586 Query 180 AGCTAACCCCATC-AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 ||||| | ||| |||||||||| |||| ||||||||||||| |||||||| || | Sbjct 20587 CGCTAA-CAAATCTCTTTAACCTTCCAGCACTGGGCAGGCGTCACCCCCTATACATCGTC 20645 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 || || || |||||| ||||||||||| ||||||||||| Sbjct 20646 TTACGACTTAGCAGAGAGCTGTGTTTTTGCTAAACAGTCGC 20686 >seq920 Length=66673 Score = 262 bits (290), Expect = 1e-67 Identities = 230/281 (82%), Gaps = 4/281 (1%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||||||||||||| | | ||||||| |||||| | |||||||| Sbjct 8416 CGCGGGTAACCTGCATCTTCACAGGTACTAAGATTTCACCGAGTCTATAGCCGAGACAGC 8357 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||| Sbjct 8356 GTCCGGATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCTGACAAGGAATTTCGCTACC 8297 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC-GATCAAGAGCTTCGCGTT 179 ||||||||||||| ||||||||||||||| || |||||||| | |||| |||||||| | Sbjct 8296 TTAGGACCGTTATAGTTACGGCCGCCGTTCACTGGGGCTTCAGTTCAA-AGCTTCGCTTA 8238 Query 180 AGCTAACCCCATC-AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 ||||| | ||| |||||||||| |||| ||||||||||||| |||||||| || | Sbjct 8237 CGCTAA-CAAATCTCTTTAACCTTCCAGCACTGGGCAGGCGTCACCCCCTATACATCGTC 8179 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 || || || |||||| ||||||||||| ||||||||||| Sbjct 8178 TTACGACTTAGCAGAGAGCTGTGTTTTTGCTAAACAGTCGC 8138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260775086592