Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1322 526 7e-147 seq920 520 3e-145 >seq1322 Length=110664 Score = 526 bits (582), Expect = 7e-147 Identities = 415/494 (84%), Gaps = 14/494 (3%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23582 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 23523 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCC-CTCTAGAG 125 |||||||||||||||||||||||||||||| ||||||||| | || || ||||| Sbjct 23522 TAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATACCTTGCGAAGCTATAGAG 23463 Query 126 ATAGAGGTTTCCCCTTCGGGGG--ACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTC 183 ||| || | | || ||| | ||||||| ||||||||||||||||| || Sbjct 23462 ATATAG---------TAGAGGTTAACAAGGATACAGGTGGTGCATGGTTGTCGTCAGTTC 23412 Query 184 GTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCAT 243 ||||||||||||||| |||||||| | ||||||| |||||||||| ||||||||||| Sbjct 23411 GTGTCGTGAGATGTTTGGTTAAGTTCAGCAACGAACGCAACCCTTGTCCTTAGTTGCCAG 23352 Query 244 CATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGAC 303 |||||||||||| |||||||| |||||| ||| || | |||||||||||||||||| Sbjct 23351 CATTAAGTTGGGGACTCTAAGGAGACTGCTAGTGT-AAGCTAGAGGAAGGTGGGGACGAC 23293 Query 304 GTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAA 363 |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 23292 GTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGCTGATACAAA 23233 Query 364 GGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAG 423 | | || |||||||||||||||||||||| || ||||| ||||||||||||||| || Sbjct 23232 GAGTCGCTAAACCGCGAGGTCAAGCAAATCTCAAAAAGTCAGTCTCAGTTCGGATTGAAG 23173 Query 424 TCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGG 482 |||||||||||||| |||||| ||||||||||||||||| |||||| ||| ||| Sbjct 23172 TCTGCAACTCGACTTCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCAATGTCGCGG 23113 Query 483 TGAATACGTTCCCG 496 ||||||||||| || Sbjct 23112 TGAATACGTTCTCG 23099 >seq920 Length=66673 Score = 520 bits (576), Expect = 3e-145 Identities = 414/494 (84%), Gaps = 14/494 (3%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5495 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 5554 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCC-CTCTAGAG 125 |||||||||||||||||||||||||||||| ||||||||| | || || ||||| Sbjct 5555 TAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATACCTTGCGAAGCTATAGAG 5614 Query 126 ATAGAGGTTTCCCCTTCGGGGG--ACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTC 183 ||| || | | || ||| | ||||||| ||||||||||||||||| || Sbjct 5615 ATATAG---------TAGAGGTTAACAAGGATACAGGTGGTGCATGGTTGTCGTCAGTTC 5665 Query 184 GTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCAT 243 ||||||||||||||| |||||||| | ||||||| |||||||||| ||||||||||| Sbjct 5666 GTGTCGTGAGATGTTTGGTTAAGTTCAGCAACGAACGCAACCCTTGTCCTTAGTTGCCAG 5725 Query 244 CATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGAC 303 |||||||||||| |||||||| |||||| ||| || | |||||||||||||||||| Sbjct 5726 CATTAAGTTGGGGACTCTAAGGAGACTGCTAGTGT-AAGCTAGAGGAAGGTGGGGACGAC 5784 Query 304 GTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAA 363 |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 5785 GTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGCTGATACAAA 5844 Query 364 GGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAG 423 | | || |||||||||||||||||||||| || ||||| ||||||| ||||||| || Sbjct 5845 GAGTCGCTAAACCGCGAGGTCAAGCAAATCTCAAAAAGTCAGTCTCAGTCCGGATTGAAG 5904 Query 424 TCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGG 482 |||||||||||||| |||||| ||||||||||||||||| |||||| ||| ||| Sbjct 5905 TCTGCAACTCGACTTCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCAATGTCGCGG 5964 Query 483 TGAATACGTTCCCG 496 ||||||||||| || Sbjct 5965 TGAATACGTTCTCG 5978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503970280960