Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1322 288 2e-75 seq920 288 2e-75 >seq1322 Length=110664 Score = 288 bits (318), Expect = 2e-75 Identities = 258/320 (81%), Gaps = 3/320 (1%) Strand=Plus/Minus Query 21 GAGATGGATACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGA 80 || ||| | |||| |||| || |||| | | ||||||||| |||| || | ||||| | Sbjct 20323 GATATGCAGACGCTAGTAGGCATGGAGTCACCATTGGGATACCACCCTTGCTATATTGAA 20264 Query 81 TTTCTAACCGGACGACGTATAACC-GTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTG 139 ||||||| || ||| |||| | | | |||||||||| | ||| |||||||||| Sbjct 20263 ATTCTAACTTGA-GACC-ATAATCTGGTCTAAGGACAGTGTCTGGTGGGTAGTTTGACTG 20206 Query 140 GGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAA 199 |||||||||||||| ||| |||||||||||||||||||| |||||||| || |||||| Sbjct 20205 GGGCGGTCGCCTCCTAAAAAGTAACGGAGGCGCCCAAAGGTACCCTCAATATGAATGGAA 20146 Query 200 ACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAG 259 | ||| | | || ||||||| ||||||||| |||||||||| || |||||| ||||| Sbjct 20145 ATCATATGTAGAGCGCAAAGGTAAAAGGGTGCTTGACTGCGAGACATACAAGTCGAGCAG 20086 Query 260 GGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGA 319 | |||||||| ||||||| |||||||||||||||| ||||| ||||||||||| ||||| Sbjct 20085 GAACGAAAGTTGGGCTTAGTGATCCGGCGGTGCTGTGTGGAAAGGCCGTCGCTCAACGGA 20026 Query 320 TAAAAGCTACCCTGGGGATA 339 |||||| ||||| ||||||| Sbjct 20025 TAAAAGTTACCCCGGGGATA 20006 >seq920 Length=66673 Score = 288 bits (318), Expect = 2e-75 Identities = 258/320 (81%), Gaps = 3/320 (1%) Strand=Plus/Plus Query 21 GAGATGGATACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGA 80 || ||| | |||| |||| || |||| | | ||||||||| |||| || | ||||| | Sbjct 8501 GATATGCAGACGCTAGTAGGCATGGAGTCACCATTGGGATACCACCCTTGCTATATTGAA 8560 Query 81 TTTCTAACCGGACGACGTATAACC-GTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTG 139 ||||||| || ||| |||| | | | |||||||||| | ||| |||||||||| Sbjct 8561 ATTCTAACTTGA-GACC-ATAATCTGGTCTAAGGACAGTGTCTGGTGGGTAGTTTGACTG 8618 Query 140 GGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAA 199 |||||||||||||| ||| |||||||||||||||||||| |||||||| || |||||| Sbjct 8619 GGGCGGTCGCCTCCTAAAAAGTAACGGAGGCGCCCAAAGGTACCCTCAATATGAATGGAA 8678 Query 200 ACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAG 259 | ||| | | || ||||||| ||||||||| |||||||||| || |||||| ||||| Sbjct 8679 ATCATATGTAGAGCGCAAAGGTAAAAGGGTGCTTGACTGCGAGACATACAAGTCGAGCAG 8738 Query 260 GGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGA 319 | |||||||| ||||||| |||||||||||||||| ||||| ||||||||||| ||||| Sbjct 8739 GAACGAAAGTTGGGCTTAGTGATCCGGCGGTGCTGTGTGGAAAGGCCGTCGCTCAACGGA 8798 Query 320 TAAAAGCTACCCTGGGGATA 339 |||||| ||||| ||||||| Sbjct 8799 TAAAAGTTACCCCGGGGATA 8818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982380587776